| Genomic Position | scaffold1107:- 16863-18101 |
|---|---|
| See gene structure | |
| CDS Length | 1239 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 0 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012493 (3e-39) |
| Best Drosophila hit | ionotropic receptor 7c (2e-15) |
| Best Human hit | glutamate receptor, ionotropic kainate 4 precursor (3e-06) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (5e-24) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (2e-18) |
| GeneOntology terms | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0004970 ionotropic glutamate receptor activity GO:0016020 membrane |
| InterPro families | IPR019594 Glutamate receptor, L-glutamate/glycine-binding |
| Orthology group | MCL18111 |
Nucleotide sequence:
ATGTTATTTCAAAATCGTCTAAAGAATTTTCATAAATGTCCTCTTATTGTGTCTACATTT
GAACAGCCTCCATTCATGTATTTAAATAATGAAACTAAACAACCTACAGGAAGTGATGGA
GATATCATCAGACTAGTGGCAGAAGCATTGAATGCTACAATGGAAATAAAAATACCTTCA
GCAAGTGGTACATGGGGGAATTATGAAAATAATAACTGGACTGGGTCTTTGGGCGATGTA
TTTAACGACCGCGTTCACGTGTCCGTTTGTTCATTGCCTATTTCCGAAGATAAGTATGGT
AATTTTCAAATATCCTATATCTACAACTCAATGGATATAGTTTGGACAGCTGAAATACCA
CCCATAAAGCCATCTTGGACTAAATTGCTCTCTTCTTTGGACATAACGTTACGAATTGCA
GTATTCTTAATGTTCATTGCAATTGCCTTCATCAACACTATTTTAAAAAGCCATCATTGG
CGAAAATTTGTCAAAGTTTTCACAATAAAATCTTTTCGATCTAATCTACTAATTAATTCC
TGGGCCTTATTTCTCGGAATACCGATATTAAGAATGCCAAACAAACGGGCACTTAAATTA
ATTGTCTTTAGTTGGATTTGGTTCAGTTTTATTATCAAAATTGCATATCAAGCAGCATTA
ATAAGTTCTCTGAAGAATAAACAATTTGGAGATAATTTCCCTGACTTTGAGTCAGTGATA
AAAACCAAGCGCCCTTATGGGGGTTTGCCAACTCTTAGGCAATATTACGAAGAGGATCCT
TACGTTTATGACAACTGGATAGTTCTAGATTTCGATGAATCTTATGAAATTTTAGAACAA
ATATGTGACGTTTCAACAAACTTTGTTCTTGCATTTAATAAGGAAATAATAATGGAACAC
CTTTTTAAGTACAATGGAACAAAGAGATTACAGATATTGCCATATAAAATTGTGAACAGT
CCTACAGTGATGTATTTCAAGAAGTATTCTGTTTTTGAGGCTCCCGTTAGCACTGTGCTC
AGTAGAATGGTGGAATCGGGACTTACTCAATTCTGGCGTAACAGATATTTGACATATGTA
AACTTTTTCTTTCGTAGAATAGAAGATCACGAAGAGGAACCGTTTACGTTCGACAATTTT
AAAGCATGTTTGGCCTTATTAGTTTTTGGTTGGATTTTATCAATAATATTTTTTGTATTA
GAGGTTTTTTGTGGGAGATATGAGAAGAGGCTTAAATAG
Protein sequence:
MLFQNRLKNFHKCPLIVSTFEQPPFMYLNNETKQPTGSDGDIIRLVAEALNATMEIKIPS
ASGTWGNYENNNWTGSLGDVFNDRVHVSVCSLPISEDKYGNFQISYIYNSMDIVWTAEIP
PIKPSWTKLLSSLDITLRIAVFLMFIAIAFINTILKSHHWRKFVKVFTIKSFRSNLLINS
WALFLGIPILRMPNKRALKLIVFSWIWFSFIIKIAYQAALISSLKNKQFGDNFPDFESVI
KTKRPYGGLPTLRQYYEEDPYVYDNWIVLDFDESYEILEQICDVSTNFVLAFNKEIIMEH
LFKYNGTKRLQILPYKIVNSPTVMYFKKYSVFEAPVSTVLSRMVESGLTQFWRNRYLTYV
NFFFRRIEDHEEEPFTFDNFKACLALLVFGWILSIIFFVLEVFCGRYEKRLK