| New model in OGS2.0 | DPOGS214478 |
|---|---|
| Genomic Position | scaffold1302:+ 11460-15425 |
| See gene structure | |
| CDS Length | 1917 |
| Paired RNAseq reads | 939 |
| Single RNAseq reads | 2545 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013412 (2e-45) |
| Best Drosophila hit | mediator complex subunit 26, isoform A (5e-10) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 26 (1e-11) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC015824 [Tribolium castaneum] (4e-15) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC015824 [Tribolium castaneum] (1e-14) |
| GeneOntology terms | GO:0003702 RNA polymerase II transcription factor activity GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0003677 DNA binding GO:0016592 mediator complex GO:0003746 translation elongation factor activity GO:0005634 nucleus GO:0006354 RNA elongation GO:0016455 RNA polymerase II transcription mediator activity GO:0005515 protein binding |
| InterPro families | IPR017923 Transcription factor IIS, N-terminal IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type |
| Orthology group | MCL40849 |
Nucleotide sequence:
ATGCAGACTGTTAATGAAATTATTTCCATTCTGGAGAAATTTAATATCACAAAAGAGCTG
TTGGAGACCACCAGACTCGGTAAGCATGTGAACGAGCTCCGTCGTAAGACAAGCGAGCCG
ACACTGGCTCGCCGCGCCAAGGTGCTGGTAAAGCGCTGGCGGGATCTCGTCATACCTAGC
ACACACTCACCCGCACATACTGGCTCAAATCGTTCGTCTGCTGAGCGTCAAGTTAGGAGG
CTCGGTGGAACTCCACTCACTTCACCGGCACTCTCCAGGAACCTGGTGAGTCCAGCTGTT
CCAAGTCCAAGACCACCTTCTAGACCAGCGTGGGGTGGCTACGAGTCGGACTCGCAGGAC
GTGATCCTGGTGGACGACGACCCCCCTCCCCCTGTGACCCCCTCCCTAGCCCCTCTCCCA
CCACACAAACCGGCAACACCTCCTGTAAAAAGGGCGCTGTCACCCGAACCTCTATACGAT
GAAAAGAAGGCGAAAAGAGATAAAAAACCTAAGAAAAGAAGGGGTCATGGTAGAGCGGGC
TCGGGGACTGAGACGACAGCGGAGCCCCAGAGTCAACACAACTGGGTGTCCAGGAACGGG
ACAGGACCTGAACGGAGACGGAATGGATGGAAACGAGACCCACCAGACCCTTACGCTGCG
CTCGTTAATAGACTGCCTCCCGCCGGGGCTAAGAAGGTGAAGACGACCAAGGAACTGCTG
GAACAGATCCAGTCCCGCGGCAGCAGTCGACCTTCCCGCCCGGCCTCCCCGCGCTCCCCG
CACTCCCCGGCCTCCCCTGCCTCCCCCGACGTCATGCTCATCGAGCCTGACGTGTGCCCT
ATCAAAGTCGAGTCCCCGCTTCGGAACGGCGGCGGAGATTCCGCGAAGACGAAAATGGAT
CCCGAGCCAGAGGAGCGTGAGGAGGTCCCGCCGCTAGAGGAGCCGCGCGCCTGGGCGGAG
TGCACGTGCGGCGAGGAGGAGGCGTCAGCGGACTGTCCTGCCGCTGGGCGCCCGGCGCTC
CGGCCGCTCCACGTCCGGGCGCTGCACAACGTGCTGCTTCCGGGGATGAACGGCACGCGA
GCCCCGCTCTTCCCTCACCGGTTCGCCGTCCGCCCTCCCGCGCGCGACGACGACCCCACG
CTGTTCTCCAGCGTGGTGCCCCTCTATAACTACTCAGACTACGCGGACGACCACTGTGTC
AAAAACATGTCCCGAGTGCCGATCTGTGAGCGCCTGCCGTGGACGGAATTCGCGCCCTCG
CCGCCGCCTCCGTCTCCGCCGCCTTCGCCGCCGCCACTGCGACCCTACCCTTCGCCGCTC
CGCGAAGAAGTCTTCCCCGACTTGCCGGAACCCGACGATGATTCCGCGGACTCCTCCACC
ACGCCCAACGTGATCGAAGCTACGAGCGAGGACGAGCCCAGAGAGAAGCCGGTCATCGAG
CCAGCTATGGTCGGCCTCGCCTACATGGAGCCCGGGGAAAGGTTGAAGGCGCCGCTGCTG
GACGACGACGACGACTACCAGCTCGGGGAACCGCGCCGGGAGGTGACGGTCGAGAAGAGC
TTCGTCAGTGAACCCCAGGAACATCGCACGGTCGAGAGGACGAAAGAGGACATAGACGGC
CGGACGTTGTACGGCCTGTGCGAGGCGGCCCTGGCCAGCGTGCCCTACCGGTACTCGCAG
GCGGCGGCGGCGCCGGTGTTGACGCTGCCGCAGCTCATCGAGAGGGAGAACGAACCTCCC
GATCACGTGGCGGAGGACGAAGCCGCCAAGCTGCTGGAGGGCGCGCTGGAGACCGCTGCC
GCCGACCCGGCCCTCGACGAGCTGGGCCGACCTCAGCGACCTCTGTCGTTCGCGGAATGG
CACGAGTGCGCCCGCCTCGGGGACCTGGTGGCCCTGCCGTACGTCGTCATCGACTGA
Protein sequence:
MQTVNEIISILEKFNITKELLETTRLGKHVNELRRKTSEPTLARRAKVLVKRWRDLVIPS
THSPAHTGSNRSSAERQVRRLGGTPLTSPALSRNLVSPAVPSPRPPSRPAWGGYESDSQD
VILVDDDPPPPVTPSLAPLPPHKPATPPVKRALSPEPLYDEKKAKRDKKPKKRRGHGRAG
SGTETTAEPQSQHNWVSRNGTGPERRRNGWKRDPPDPYAALVNRLPPAGAKKVKTTKELL
EQIQSRGSSRPSRPASPRSPHSPASPASPDVMLIEPDVCPIKVESPLRNGGGDSAKTKMD
PEPEEREEVPPLEEPRAWAECTCGEEEASADCPAAGRPALRPLHVRALHNVLLPGMNGTR
APLFPHRFAVRPPARDDDPTLFSSVVPLYNYSDYADDHCVKNMSRVPICERLPWTEFAPS
PPPPSPPPSPPPLRPYPSPLREEVFPDLPEPDDDSADSSTTPNVIEATSEDEPREKPVIE
PAMVGLAYMEPGERLKAPLLDDDDDYQLGEPRREVTVEKSFVSEPQEHRTVERTKEDIDG
RTLYGLCEAALASVPYRYSQAAAAPVLTLPQLIERENEPPDHVAEDEAAKLLEGALETAA
ADPALDELGRPQRPLSFAEWHECARLGDLVALPYVVID