| New model in OGS2.0 | DPOGS215199 |
|---|---|
| Genomic Position | scaffold4083:+ 2746-12622 |
| See gene structure | |
| CDS Length | 2835 |
| Paired RNAseq reads | 1154 |
| Single RNAseq reads | 3287 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008679 (1e-14) |
| Best Drosophila hit | ND |
| Best Human hit | kinetochore protein NDC80 homolog (1e-07) |
| Best NR hit (blastp) | PREDICTED: kinetochore protein NDC80 homolog [Callithrix jacchus] (4e-12) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Apis mellifera] (1e-07) |
| GeneOntology terms | GO:0000776 kinetochore GO:0000777 condensed chromosome kinetochore GO:0007052 mitotic spindle organization GO:0007059 chromosome segregation GO:0031262 Ndc80 complex |
| InterPro families | IPR005550 Kinetochore protein Ndc80 |
| Orthology group | MCL40314 |
Nucleotide sequence:
ATGTGGAAGAGTGGTAATTGGGTGAAATATGAAACTAAAGCTTTCCCTTTGGTATTAAGA
CTTCACTATGATCAGCTTCTTATTACAATGGAGGAAAAAGTTATAGAATCACTTAATATA
AATAGCAAACTAAAAGGGATTTTCAAAGATGACGTACTTATATTAATTATTAGCGTTATT
GGACAGGAGGTCAGAAAAATTAAATTTCAAATTAAAGAAAATGTTAACCAGTGCTTACAA
AAATTAGGTTTAAGATTCCCTGTGTTAAAATTTGGTTCAGAGCCTTCTAGAAAAAAATTT
AAAGGAAAATATCGTAATGTAGAGGACATATTAAAGAAAACATTTGAAGTAAAAGAAGGC
AAGCCTTCTCTTCTTCCTAAGCCTCGTCGGCCGGGTTCAAGTGATCGATTATCAACGGAG
ACTCGTCGTCCTTCTGCAGCTGGACACAGATCTAGCAGCGCTGATCCACCTAGAGGAACA
TTCGGCCCTCGGTTGAGCAGAGAGGCTTCTGCTACGAAGCTACCTGTGAATGGGAGGTCT
AGATCACAAACAGGTGACGCTAAGTATGGTGCGGCCACCTCAACTCCATTGCGAGTAAGC
CACTACAGGTCTACTACTACTCCACAGAGAACCCCTTCAGAGGATCGGCTGAATCGTGAT
TGGAAGACCTGTCTTGAAAGAGCATTAGCCTTTGTGACCATCAAAGATCAGAGGCCAATA
TCTAATGTGGCCTGGCAGCGTTCTGAGTGTGCGAGGGTGGGTGAGGCTCTGGCCAAGCGA
GAGTCTTCGATGGCTCTGATCCGTCCGCTGACTATCACACGCTTTGTGGACACCGTCGGG
GCTCTACTGACTGCTATCACCAAGGATGCTAAACTTAATAATGACAATTACGTTACTAAA
CTGCCTCACCTGTCTAAGCGTGTGTTGTACCCCGGGCCAGTCTCCAAGTCCTGGCTACGT
ACAGTCAACACTCTTCACGCCTTCCCTCATGCGCTGGCTCTGGTGGCCTACCTCCTGGAC
CTGGTGACACACATAGAGAGTCCGGTGGAGGACGACTGGCTTTACATCAGTAAGGACGAC
TTGAGCTGTCTGCGGAGAGACTACTTGTATAAGTGCTGGATAAGATTCCAACATCCAGGA
CACCAGTTCGAGGATCTAAAGTTTGAGTTGCTATTTTTAAAAGTGGTAGCTAGTTACTAC
AGCACAAACTTGGGCGGGCTCGAACAAGAAAGTACCACTGAATTATTCACAGAAGATCGG
CTTGAGAGAACCCCTTCAGAGGATCGGCTTAATCGTGATTGGAAGACCTGTCTTGAAAGA
GCATTAGCCTTTGTGACCATCAAAGATCAGAGGCCAATATCTAATGTGGCCTGGCAGCGT
TCTGAGTGTGCGAGGGTGGGTGAGGCTCTGGCCAAGCGAGAGTCGTCGATGGCTCTGATC
CGTCCGCTGACTATCACACGCTTTGTGGACACCGTCGGGGCTCTACTGACTGCTATCACC
AAGGATGCTAAACTTAATAATGACAATTACGTTACTAAACTGCCTCACCTGTCTAAGCGT
GTGTTGTACCCCGGGCCAGTCTCCAAGTCCTGGCTACGTACAGTCAACACTCTTCACGCC
TTCCCTCATGCGCTGGCTCTGGTGGCCTACCTCCTGGACCTGGTGACACACATAGAGAGT
CCGGTGGAGGACGACTGGCTTTACATCAGTAAGGACGACTTGAGCTGTCTGCGGAGAGAC
TACTTGTATAAGTGCTGGATAAGATTCCAACACCCAGGACACCAGTTCGAGGATCTGAAT
GAAGAGTATCTGGTGAACTTGAAGTCGTTGCTGGGGAACGACGAGGAGAAGATCAAGGAG
TTGGAGCAAGTTATACTGAAATACTCTGCGTGTCTGAATGACGAGGCGGAGGCGGCCGCT
CGGGCTGAAGTGGCGCGGCGCGAGGAGAGGGACACGCGGGCCGCCAGTGAAGCCCTACGG
GCAGAGGCCAGGGACGCGGACCAGGAGGCTAAGATGATAGACGCTGACGTCGACAGAATC
AGTGCGGAGCTGGAGCGCGTGACGTCAGACCTGGAGTCGCAGGTGATGTCTCGTGAGCAG
CGCGCCAGACTGCTGGACGACTTGGACTACGCCGTCAGGGTGCACGACTCCAAGAGGACG
CTGGCCGACGAGATACAGAAGATGGTGTCAAGCAAAGAGACGGAGCTGGCTCTGTGGCAG
AAGAAGACCCTGGAGAGCTGCGGGGAGTACCGCCAGAGGCTCATACACCTGGCGGGGCTG
CCGGCGCTCAACGCACTCGCCATCGACGAGAATTCGTTGATGGGTGCCGAGTGTGTGTCG
CTGGTGACCCTGGCCGTGGACACGCTCCGTGAGGAGGCCAGCCGTCTGTCCGCTAAGAAG
AATGAACTCCTGAGGACCAGGAGCGCTCTGGCCAGGAAGAGAACTGCTATGATGGAAGAG
GCGCGGTCGAAGATCGGCGAGGTGGCCGCGACCGTGGAGAGAGAACAGAAGAGTCTAGAG
GGAGAGAGAGAGAGGGAGGCAGAGGAGGTGAGGAAGTGGACCAAGCACGAGGGAGAGACG
CGCACCAGGCTACAGGAGCTGGAGCACAGGATACAGCAGTACAGGAGCGTGGCCGACCAC
CTCGCCTACTGGGAGGACAGGGACGGACTGTGGAGATCCAAACTGTCGGAGTTGAAGGAA
TATATAGAGCAGCAGAAGATTGTGATGCAGAAGAGGCTGGAGCAGGGGAGGGCGAGGAGG
GCGCAGCTGGTCGAGGGTACCCTCCGCCTGTGGAGGGAGAAGCTGGGCGGGAACAGCGAA
ATACACAGGGAGTGA
Protein sequence:
MWKSGNWVKYETKAFPLVLRLHYDQLLITMEEKVIESLNINSKLKGIFKDDVLILIISVI
GQEVRKIKFQIKENVNQCLQKLGLRFPVLKFGSEPSRKKFKGKYRNVEDILKKTFEVKEG
KPSLLPKPRRPGSSDRLSTETRRPSAAGHRSSSADPPRGTFGPRLSREASATKLPVNGRS
RSQTGDAKYGAATSTPLRVSHYRSTTTPQRTPSEDRLNRDWKTCLERALAFVTIKDQRPI
SNVAWQRSECARVGEALAKRESSMALIRPLTITRFVDTVGALLTAITKDAKLNNDNYVTK
LPHLSKRVLYPGPVSKSWLRTVNTLHAFPHALALVAYLLDLVTHIESPVEDDWLYISKDD
LSCLRRDYLYKCWIRFQHPGHQFEDLKFELLFLKVVASYYSTNLGGLEQESTTELFTEDR
LERTPSEDRLNRDWKTCLERALAFVTIKDQRPISNVAWQRSECARVGEALAKRESSMALI
RPLTITRFVDTVGALLTAITKDAKLNNDNYVTKLPHLSKRVLYPGPVSKSWLRTVNTLHA
FPHALALVAYLLDLVTHIESPVEDDWLYISKDDLSCLRRDYLYKCWIRFQHPGHQFEDLN
EEYLVNLKSLLGNDEEKIKELEQVILKYSACLNDEAEAAARAEVARREERDTRAASEALR
AEARDADQEAKMIDADVDRISAELERVTSDLESQVMSREQRARLLDDLDYAVRVHDSKRT
LADEIQKMVSSKETELALWQKKTLESCGEYRQRLIHLAGLPALNALAIDENSLMGAECVS
LVTLAVDTLREEASRLSAKKNELLRTRSALARKRTAMMEEARSKIGEVAATVEREQKSLE
GEREREAEEVRKWTKHEGETRTRLQELEHRIQQYRSVADHLAYWEDRDGLWRSKLSELKE
YIEQQKIVMQKRLEQGRARRAQLVEGTLRLWREKLGGNSEIHRE