New model in OGS2.0 | DPOGS213245  |
---|---|
Genomic Position | scaffold285:- 206494-212466 |
See gene structure | |
CDS Length | 2538 |
Paired RNAseq reads   | 516 |
Single RNAseq reads   | 1232 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009442 (8e-08) |
Best Drosophila hit   | CG42330, isoform E (3e-29) |
Best Human hit | PREDICTED: LOW QUALITY PROTEIN: hemicentin-2 (2e-33) |
Best NR hit (blastp)   | PREDICTED: hypothetical protein [Monodelphis domestica] (3e-53) |
Best NR hit (blastx)   | PREDICTED: hypothetical protein [Monodelphis domestica] (4e-52) |
GeneOntology terms    | GO:0005576 extracellular region GO:0030054 cell junction GO:0018298 protein-chromophore linkage GO:0005604 basement membrane GO:0005509 calcium ion binding GO:0005938 cell cortex GO:0008218 bioluminescence GO:0050896 response to stimulus |
InterPro families    | IPR013098 Immunoglobulin I-set IPR007110 Immunoglobulin-like IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013783 Immunoglobulin-like fold |
Orthology group | MCL40423 |
Nucleotide sequence:
ATGGTCGTTGATACCACGGGTTCGATGGTTGATGAAATCGAAATACTCAAAAATAATATT
CAGTCATTGATGTTAGCGATGACAAACAGGAATTTCGATAATTATATACTCATACCATTC
CTTCACTTAGATTCAGGTCCCCCCTTAATATCCCAGTCACCTCAAGGGCTTGCTGATATC
GTAAGTGTTATTGAAGTGAGTGAAGGTTACGATTGTCAAGAAAATTCTTTGATTGCGATT
CAAAAAGCTCTAGAAGTTAGCAAACCAAGGTCTACCATATTTGTGTTCACGGATGCTGAA
GCCGAGGATGCAGATAAACTCTATACTATACAGAACTTGTGTGAAAATAGTCAAAGCCAG
GTGATAATTTTTCAAAGTGGCACCTGCTTTACACGAGAATCACAAGCAGCGACAGAAAAT
ATTTATAAAAAAATCGCAAATAGCTGTGGAGGTTCCCATTTCTTTTTCTATCTCAATAAT
CTGAGACAGTCATTTAAGTACATGCAAGAAGTTACTAAAGTTGATTGGACTGAGGTAAAA
ACTTACGAATTCTACGGAAGCAGACACTACCCATTTTCTGTAGATTCTTATACAAAAGAT
CTGCTTATTGCCATATCGGGGAACTATCCGACGATAGCCGTGAAGAATAACTTTGGAGAA
TCCATCGGAGTTAATGAGATTATAGAAACAACAACAATGAAAGTTATTCGTGTCGGTGAG
GCATTATTTGGTGAATATATTGCCGATATAAGCTGTCAAGGTGCGACTATGTTAACGTTT
TACAGAAAGAAAGAAGTTCAATTCAGATATGGATTTTCACCATTACAACCAAAAAGCCTC
CGAGAAACAACTCCGTTACCAATACCAGGTGTTATAAACTATTTACTTATATCTCTGCCG
GAAAACAACTTAGATTTAGTTTCAATACAATTGAAAATGTCCGATGAATACAATCACAGA
AGTATCGACCATCACGTCATTGATGAGAGCAGAAAATTGTATGCTGCAACCATATTAATT
GAACCCATGAGGACCTTTAAAGTTTTGGTGAAGTGTAGGGACATTAATAACCAAGAAATA
AGTGGAACAAGTGAACAAATGCAACCACAAAGACTGGTATTGAAATCGCAGTCGATCGCA
CCGGAAGCAAAAATATTAGAAGTTGATCCCTTAATCAACTTCGGTTCAAGTTACTCTCTA
GCCTGCAAAGTGAACAGTTATCCCAAACCGGAAATTTGGTGGGAGGATAGTATGGAGGAA
AAATTACCTTCCGAGAGCGCATTGCTAGAAATACCACACGTTTACATAAGTTACTTGAGA
ATTGAAAATGCTACTAGAAATGACACTATTACTTGCAAATGTAAAAATACAGAAGGAGAG
GATGCAGTTTCTACAAATATATACGTCAATAGAACGTTCACATTTGATGTAATACAGACC
CCATCAGATATAACTGTCGAATATGGCGCAGAAGGAAAACTTTTTTGCGAAGCAAACACT
TATCCTGAATCAGAAATAAAATGGTATCATAACGATACCCTTATAGAAAGCTTAGAGGAT
TTTGATATAATAGAAGATGAGCACATGTTACTAATAAAAAATATGAACCTTAATCATACA
GGAACTTACAATTGTGAAATATCTAATAGTGAAGAAACAAGAACATTTTCGTCAAACGTT
TACATCTCAGGCCTTGAAACTCCACAAATTGATTTGGGAAATTCAGAGATTTTATTGAAA
CCGGGCGACGAGACTGAACAAGAGTGCACCATTATAAAAGGAAAACCGTTCCCTGAGATA
TCGTGGAAATATAAATCTAGTTATGACAATATTGACTTAAGTGACGTACCAGATGGTGTG
AAAATTAATGGGGCCGCGTTGAAAATTGATTATGCCGATTTATATCATAGTGGTTTTTAT
GTCTGCGAAGCTATTAATATTTTAGGAACGGATACCCAAGAGATTTCTGTTAAAATACAA
TATCCTCCTAAGATAAGAAATGGAGATGAGAAAAAGATCGTGAAATACGGAGAGACTGTA
GACCTGATTTGTGATGTTGACGCTGTTCCGACTGCATCAGTCCGTTGGGATATGTACCAG
GATGACATTGCTATACCCTTCGATGCCCGCCATAGCACAAACGATAGAAACACACATCGA
TTTACAGCTAACACGAGAGACTCTGGGTTGTATGTCTGTACGGCGCAGAATGTTTTAGGT
ACTGCCACGAGGAAAGTAAAGGTTAATGTACTTGTGGCACCTTATATAGAGGCGTTGGAG
TGGAATACGCTCACGGCTAGAAGGGGCTCAACAGTTAATTTAAGTTGCAAAATCATTTTG
GGTAACCCTTTGCCGAAGATAAAATGGGTGTACATTGCACCAAATCTCAATACAACCGAG
TTGGTTAGATCAGATTCAGCTGGGATATTAGATTTAGTATTAGAGGACATCACAAAGAAA
CATGAGGGTTCCTATCAGTGTATTGCCGAAAATGATGTCGCAGTAGACTCGATTAAACTT
TTGCTTACAGTTATTTAA
Protein sequence:
MVVDTTGSMVDEIEILKNNIQSLMLAMTNRNFDNYILIPFLHLDSGPPLISQSPQGLADI
VSVIEVSEGYDCQENSLIAIQKALEVSKPRSTIFVFTDAEAEDADKLYTIQNLCENSQSQ
VIIFQSGTCFTRESQAATENIYKKIANSCGGSHFFFYLNNLRQSFKYMQEVTKVDWTEVK
TYEFYGSRHYPFSVDSYTKDLLIAISGNYPTIAVKNNFGESIGVNEIIETTTMKVIRVGE
ALFGEYIADISCQGATMLTFYRKKEVQFRYGFSPLQPKSLRETTPLPIPGVINYLLISLP
ENNLDLVSIQLKMSDEYNHRSIDHHVIDESRKLYAATILIEPMRTFKVLVKCRDINNQEI
SGTSEQMQPQRLVLKSQSIAPEAKILEVDPLINFGSSYSLACKVNSYPKPEIWWEDSMEE
KLPSESALLEIPHVYISYLRIENATRNDTITCKCKNTEGEDAVSTNIYVNRTFTFDVIQT
PSDITVEYGAEGKLFCEANTYPESEIKWYHNDTLIESLEDFDIIEDEHMLLIKNMNLNHT
GTYNCEISNSEETRTFSSNVYISGLETPQIDLGNSEILLKPGDETEQECTIIKGKPFPEI
SWKYKSSYDNIDLSDVPDGVKINGAALKIDYADLYHSGFYVCEAINILGTDTQEISVKIQ
YPPKIRNGDEKKIVKYGETVDLICDVDAVPTASVRWDMYQDDIAIPFDARHSTNDRNTHR
FTANTRDSGLYVCTAQNVLGTATRKVKVNVLVAPYIEALEWNTLTARRGSTVNLSCKIIL
GNPLPKIKWVYIAPNLNTTELVRSDSAGILDLVLEDITKKHEGSYQCIAENDVAVDSIKL
LLTVI