| New model in OGS2.0 | DPOGS214433 |
|---|---|
| Genomic Position | scaffold410:+ 41147-43113 |
| See gene structure | |
| CDS Length | 1353 |
| Paired RNAseq reads | 205 |
| Single RNAseq reads | 519 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011352 (3e-21) |
| Best Drosophila hit | Ran GTPase activating protein (2e-06) |
| Best Human hit | leucine-rich repeat-containing protein 34 isoform 2 (5e-16) |
| Best NR hit (blastp) | PREDICTED: similar to leucine rich repeat containing 34 [Tribolium castaneum] (1e-61) |
| Best NR hit (blastx) | PREDICTED: similar to leucine rich repeat containing 34 [Tribolium castaneum] (7e-60) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype |
| Orthology group | MCL18150 |
Nucleotide sequence:
ATGAAAAAACCGACACGCAAAAGGAAATGCATCTGCGATACTGTGGCCATTTTGAAAAAG
ATAACAGGAAATCCGGAACCATTGAGTTCGACGGAAATTAACAGCATACGCCTGAATCTT
TTCACTGAACGTAACTCGGACGGCACCGGGTACTTGGTGCTGAGAGGTAAAGACATATAT
GAAAAATATAACAGAAGAATTTGTGACAGCGACGTGAGAGCTATATGTCTTTACTTAAAA
CATTCACCAAGAATAATAACAAAAGTCGACCTGAGTTACAATTCCATAACGGATACAGGA
TTTTTTAAATTGTTAAAAAACGTTCTAATAAAGGGCAGATCCAGCGTTACCAACCTCAAT
ATTATGAATAACAATATCACAGAGTTGTCCATATTGAACCTGTCGAAGTATGCGAAGTTT
TTGAAACTTAAATATCTAAGAATTAATGGAAACGATTTCGGGACTAAAGGCGGCGAATAT
TTCGCCGATCTATTGTCGAATAACAGGAGTATTGAATGTTGCGACATCGGGGAGACGGGA
CAGACGTTAACCAGTGTTGCCCACATCATCACCGCCCTGCGCTACGATCACGCTGGCAAC
ACTACTTTAAGAGTTTTCGATTTCAGCCGAATTATTCCATTGTTCAATAGATACTCGTAT
GAAACAAAGTGGCTCGCTTATCACATCGAATATTTATTAGAACGAAACGATACCATCGTA
GAGTTACATTTACAGAAAAACGAATTAATTGGACACGACGTAGAATACTTAGTGAGAGGT
CTGCGGAACAACAAGACGTTGCTGTACTTGGATATTGGATATAATAAGATAGGGGAATAC
GGCGCTGAATTATTCGGACAATATTTATCTGAGAAGCCGCAACTGATATTATTGAACTTA
GCGGGAAACGGCATCAGGGACACAGGCGCCAGAGCTCTCAGCTTCGGTCTCCCATATTCA
AGAATACGTGCCTTAGACCTGGGACACAATAAAATCACCGACGACGGTATCCTGTACATT
CTGAACACGATCAAGAAACCATTTTACATGAGATTCTTAAACTTGTGGGGCAATGACATC
GGGGAGACGACGTGCGGCGTCATCCAGAGGATGTTACTAAGTGGGGCTCTGTTCCAACAC
ACGATAGACGTCAGAATCCCGCTGTGCAAAGCTCTCGATATAAAGGTGACAGCAACCGTA
TTTACCGCGGGGGCGTCACAGGCCGTGGCTAGGAAGGCCGGGTTTAAGGAGCTGTACAAG
ATCTCCTACCAGGAGTTGGCAGAGCAGGGCTACAGGTTCCCGGGTATCGAAGAAGACACG
AAATACTCCAAACTGATGGCACTCGAAATTTAA
Protein sequence:
MKKPTRKRKCICDTVAILKKITGNPEPLSSTEINSIRLNLFTERNSDGTGYLVLRGKDIY
EKYNRRICDSDVRAICLYLKHSPRIITKVDLSYNSITDTGFFKLLKNVLIKGRSSVTNLN
IMNNNITELSILNLSKYAKFLKLKYLRINGNDFGTKGGEYFADLLSNNRSIECCDIGETG
QTLTSVAHIITALRYDHAGNTTLRVFDFSRIIPLFNRYSYETKWLAYHIEYLLERNDTIV
ELHLQKNELIGHDVEYLVRGLRNNKTLLYLDIGYNKIGEYGAELFGQYLSEKPQLILLNL
AGNGIRDTGARALSFGLPYSRIRALDLGHNKITDDGILYILNTIKKPFYMRFLNLWGNDI
GETTCGVIQRMLLSGALFQHTIDVRIPLCKALDIKVTATVFTAGASQAVARKAGFKELYK
ISYQELAEQGYRFPGIEEDTKYSKLMALEI