| New model in OGS2.0 | DPOGS214434 |
|---|---|
| Genomic Position | scaffold410:+ 57680-66462 |
| See gene structure | |
| CDS Length | 4365 |
| Paired RNAseq reads | 4563 |
| Single RNAseq reads | 10815 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011353 (7e-13) |
| Best Drosophila hit | CdGAPr, isoform A (3e-147) |
| Best Human hit | rho GTPase-activating protein 32 isoform 1 (1e-122) |
| Best NR hit (blastp) | PREDICTED: similar to cdc42 gtpase-activating protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to cdc42 gtpase-activating protein [Tribolium castaneum] (2e-171) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0031290 retinal ganglion cell axon guidance GO:0007165 signal transduction GO:0005622 intracellular |
| InterPro families | IPR000198 Rho GTPase-activating protein domain IPR011511 Variant SH3 IPR008936 Rho GTPase activation protein IPR001452 Src homology-3 domain |
| Orthology group | MCL16457 |
Nucleotide sequence:
ATGTCGTGCCAGTCGCTGGCGGCGCGCGCGTTCGCCGAGCCCGAGAAGGAGTCGCACTGC
GCCCGCGCCGCCACACACAGAACCGTACGCTTCAGCTCGGACCCTCGCAGCCAGAACAGG
ACCACGAGCGAGTCAGAATGCAAGAGAGAAACACCCGGTTCGATGTCCCTGAGCACGTTG
TCCATGTCTCCAGCCATGAGCCAGTCGGCGCCGAGCGCCGCGGCCGCCTTCCACATGGAC
GACCAGCCGCCCACATGTCGTTTCCCCAAGTTGGAGGAGTGCGCTCACTTCCACTACGAG
CGAGTAAGTCTGGGGGGAATCAGCGTGGAGCTGGTGCCGTGTGACTTCAGCGGGGACTCC
CCCGGGGAAGGTTGGGTGTGCCTGAAGGTCAGTAGCCACGTGAACTCCTGCGAGGAGGAC
GCAGCCGGCGCCGGAGACGACACCTGGACGCTCACCAGGAACAGGGAACACTTCCTACAG
CTGGACGACATGCTGCACAGGTGTATATATGACAGGAAGGTGTCGGGCTTGCCGTGTCTC
TCGTCAGCGCTGTCCTCGTCCCTGGACGAGCAGGCGTACTCCCGGCTGGTGGCGGACTAC
GTCCATCACCTGTCCATCATAGCCGACGACTCCATCAACTGCGGCCCGGCACTCAACTGG
CTTCAGATGGACAACAAAGGTCACAAGCTGCTGGTGGCCAACGAGGACTCCAGCTCAATT
AACACTCCAGCTGTAGCGGCGGCTTACTCCGTGAGGAAATATGTGTCCCAGGCTCGGGAT
GAGATCAGCTTCGACGTGGGTGACATGATCTCGATAATCGACATGCCAGGTCCCCAGGAG
TCCCTTTGGTGGCGCGGCAAGCGTGGGTTCCGCGTGGGTTTCTTCCCTCACCACTGTGTG
GCCGTCATCGGAGACAAGGTCCCGCGGCACATGACGCAGCCTCCGCCCATCGTGGGGTCT
GTGGCTGTGGCACCCATAAAACCGGTCCTCCGCAAGCACGGGAAGCTGATATCCCTGTTC
CGGAGCTTCATCCTGTCCAGACCTTCGCGGCGGAGTCTCAAGCAGCAGGGCATCCTGAGG
GAGAGGGTGTTCGGCTGCGACCTGGGAGAGCACCTCACGAACTGCGGACACGACGTCCCT
CAGGTGTTGGTGGAGTGTTCGCGGGCCATCGAGCAGCGCGGCGCGGTGGACGGCATCTAC
CGTCTGTCGGGGGGCGCGGCCCTGACCCAGCGGCTGAGGGCCGCCTTCGACGCGGGCCTC
GCCGCGGACCTGCGGGCCCCACTCCAGAGAGACCCGCACGCGCTGGCCAGCCTCCTCAAA
ATGTACTTCAGGGAGCTGCCCAACCCTCTGTGCACGTACCAGCTGTACGACAGCTTCGTG
TCGGCCGTCACCGCCCCGGAGCAGCTGCGACTGAAGGCGGTGAGGGACACCGTGGTCAAA
CTCCCGCCGCCCCACTACAGGACGTTGTCGTACCTCATGCGTCACTTGCGGCGCGTGTCC
CTGCTGAGCGAGTCCACGGGCATGACGGCCAGGAACATGGCCATTGTGTGGGCGCCCAAC
CTGCTGAGGTCGCCGGCGCCGCAGCACGCGCTGCAGGGGGTCGCCGTGCAGGCGGTGGTG
ACCGAGTTCCTGATATGCTACGCCGAGGAGTTGTTCTCCAAGGAGCAGGGAGCTGACTCC
GGACCGCCCTCCATAAGTCAGGAGAGTCAAGAATCTCAAATAGAACTGCGGGGCCTGGAG
GCCGGCAGACGACCCAAGAGTCTACCTTTGAACCCGCCCACTAAGTTGCTGAGCCTGGAG
GAGGCTCGGCGCCGCGGTCGACCTGCTCGGACCTCTCCCCCCGCCGACCACGTGCGCCTC
TCCACACCCGACACCATGGCGCTCCGGCCCGCCTCACACCTCACGCCCAAATATATAGAG
GTCGGCTCCGGCCCCAACAACCTGCCGCAGTACCACACCGTGCTGGAGCTGCCGGGGCCC
GGGAACAAGAGACTCAAGCGGTCCCCGTCCGGCTGGAGGGGGCTGTTCACCAGGAAGAGG
AGCTCGCGGCCTCCGCTCATACCGCACGTAATGGAGCCGTCAGCGACAGCGCTGAGGCCG
GCCGTCTCGTGCGAGTCTCTCAGCGAGGGCGAGGCGGCTCCTCCCCCGCGACCTCCACAC
CACACCAGGTCATCGTCGTGTGACTCGTACTTCGAGCCGTGGCAGGCTGAGCTCGCCACC
ATGAGGCTCAGACTGTCCCCGCAGGAGAGGGACCGGCACATGTTCAGCGAGGAGGACGAC
GCGCACGCGCAGCACGGCGCCGCGGAGGACTCCCTCAACACCACGCCGGGGAACAGCGCG
GTGGGCAGCGCCGCGGACACGCCGAGACGGACGAGAGACGACAACACGGAGCGGAAGAGG
GTGTCCCTGGAACAGCTGGAGCGGCGCGTGGCCAGACTCGGCTACATCGACAGCGACGAG
CCCGGGGACAACACGCGCGCCAAGAGACTGTGCAAGGACCGAGACAGTCCGCAGTCTTCA
GGCCTAGAGCTGCCGGCCCTGACTAACGTTAAGATGAGAGAGAGAACCTCCCCGAGGAAA
CAGAAACCCTCGGCTCGATACAGCGGTCTCCAGCAGCCCGTCACCGCGGACAGCGAGCGA
CTCACCTGGCACGGCAAGGATCACTCCACGCTGATACGGATCGACTGGCCGGAGACGCCC
ACCCCCACAACCCCCACCACCCCCGCCCCCGCCACACCGCTGTACGACCCGCTGGAGAGT
GACTCGGAGCCCAGCGACAAGCACACCATCACCATCAAGAACAGCTGCCGGAACTGCGAC
GAGGAGAAGTGTCTCAAGTGCGAGCTGAAAGCCGCGGACTACGAGAACGTGGCGGCCGCA
GACCTCGCCAGCCTGGGCTCCACCGACATCAGCTACCACAACCTGAACCGCCTGTCCGCC
GTCTCCAGCTCCTCCGCCTCGGAGCACACCTCGCACCGCAGGGACGACCTCATGAAGATC
ATGACGTCCTCTCACGAGAGCTCCTCCGGCTACTCCAACGTGAGCTACAAGCAGGACGAG
CCGTGCGACCGCTACGACTTCGCCAGACCCGACTATGTCAACCTGTCCTCCAGCACGTCC
AAGAGCTCCCCGGCCAGTCCTCTCAAGAGTCCACTGAAGTCCACCATCAGCATAACGTTC
CGCTCCCCGGGCAGGGTCCAGACGCCGGACTACGAACCAATAGGCAACGAAGACACGCCC
ACCAATGAGCGGGACTCGGTCTACGAGGACGTAGACCTGGAGAAGAGTCTCTCCATAGTG
GAGGAGGCCAGCGTGCCGCAGACCGACGCCAGTCTCCCGACACAGGAGGCCCGGCAGCCC
GGGGACTACGGCCGTCTCGCCTCCGACCTCATCATTCTGGATACGCCCACCGACGACCGA
GACCTGTACAGCCAGGTCAAGTTCTTCAAGAAGAGCATCGAAGAAGTCAACGCCATGATA
CTGGAGACACCGGACAAGGAGGCGGACTACGAGCGCGTGGACTTTAAGACGAACAACTAC
AGCTTAGACGAGACCGAGGAAGACGGACACACGGAAGACGGGGGCGGCTCGGAGAGGGAG
AACGGAAACGTGATCACGACCAGCAACAACCTGAACGTGCGGGAGCTGGCGAACAGGTTC
GAGAGTCCTACGGAGCAGAAGGGGGCGTTCACCTTCGACAAATATAAGACGGAAGACAAA
CATGCCGCGGCCAGGAGGGACGACCACCAGCCCCGGACCACCGCGAGGACCCTCGCCCTC
GCCCGGGACACATACACGCTTACCAAGAACGTCACCGCGAGGTCGCTGGACGAGAACGCG
TTCGTCAAAGAGTTCGGATCAGACAGAGACAGGAGGAAGAGTCTAGAGGTGAAGGACGGA
CAGAGACAGGCGAGGGGCGTACCCGACCTCAACCTGAACACGGAAGACCTGCAGACCAAG
ACGGATACGGCGGAGGACAGGGTGGCGCTGATACAGGGAGCGGGCAAGGAACACGAGAAG
ATGCTGAGCAGGCAGAGAATAGAGAAGTACAAAGAGGAGAGAAGGAACTTCCTCAGGGAG
AAGTACAGCTCCCAGTCCTTCAGGAGCAGCCCGGAACAACTCACCAGGATCAAGCTGAAG
AAGAGCGACCACGAGGCCAGGACGGACGAGCCGCACAAGTTCGAGAGGAGGAACACCGTG
GACCTGGGACAGAGGATGAGGTTCACACTCGCCAGGAGCGCCAACGACCTCGACAGTATC
CCCTCCCCCGGCAGCCAGGAAGACAGGTCAGAGAAGATGTCGCCCTCCTTCAACATACGG
GACATGACGGCCATCTTCGAGCAGAAGTCGCAAGGCACCGGCTGA
Protein sequence:
MSCQSLAARAFAEPEKESHCARAATHRTVRFSSDPRSQNRTTSESECKRETPGSMSLSTL
SMSPAMSQSAPSAAAAFHMDDQPPTCRFPKLEECAHFHYERVSLGGISVELVPCDFSGDS
PGEGWVCLKVSSHVNSCEEDAAGAGDDTWTLTRNREHFLQLDDMLHRCIYDRKVSGLPCL
SSALSSSLDEQAYSRLVADYVHHLSIIADDSINCGPALNWLQMDNKGHKLLVANEDSSSI
NTPAVAAAYSVRKYVSQARDEISFDVGDMISIIDMPGPQESLWWRGKRGFRVGFFPHHCV
AVIGDKVPRHMTQPPPIVGSVAVAPIKPVLRKHGKLISLFRSFILSRPSRRSLKQQGILR
ERVFGCDLGEHLTNCGHDVPQVLVECSRAIEQRGAVDGIYRLSGGAALTQRLRAAFDAGL
AADLRAPLQRDPHALASLLKMYFRELPNPLCTYQLYDSFVSAVTAPEQLRLKAVRDTVVK
LPPPHYRTLSYLMRHLRRVSLLSESTGMTARNMAIVWAPNLLRSPAPQHALQGVAVQAVV
TEFLICYAEELFSKEQGADSGPPSISQESQESQIELRGLEAGRRPKSLPLNPPTKLLSLE
EARRRGRPARTSPPADHVRLSTPDTMALRPASHLTPKYIEVGSGPNNLPQYHTVLELPGP
GNKRLKRSPSGWRGLFTRKRSSRPPLIPHVMEPSATALRPAVSCESLSEGEAAPPPRPPH
HTRSSSCDSYFEPWQAELATMRLRLSPQERDRHMFSEEDDAHAQHGAAEDSLNTTPGNSA
VGSAADTPRRTRDDNTERKRVSLEQLERRVARLGYIDSDEPGDNTRAKRLCKDRDSPQSS
GLELPALTNVKMRERTSPRKQKPSARYSGLQQPVTADSERLTWHGKDHSTLIRIDWPETP
TPTTPTTPAPATPLYDPLESDSEPSDKHTITIKNSCRNCDEEKCLKCELKAADYENVAAA
DLASLGSTDISYHNLNRLSAVSSSSASEHTSHRRDDLMKIMTSSHESSSGYSNVSYKQDE
PCDRYDFARPDYVNLSSSTSKSSPASPLKSPLKSTISITFRSPGRVQTPDYEPIGNEDTP
TNERDSVYEDVDLEKSLSIVEEASVPQTDASLPTQEARQPGDYGRLASDLIILDTPTDDR
DLYSQVKFFKKSIEEVNAMILETPDKEADYERVDFKTNNYSLDETEEDGHTEDGGGSERE
NGNVITTSNNLNVRELANRFESPTEQKGAFTFDKYKTEDKHAAARRDDHQPRTTARTLAL
ARDTYTLTKNVTARSLDENAFVKEFGSDRDRRKSLEVKDGQRQARGVPDLNLNTEDLQTK
TDTAEDRVALIQGAGKEHEKMLSRQRIEKYKEERRNFLREKYSSQSFRSSPEQLTRIKLK
KSDHEARTDEPHKFERRNTVDLGQRMRFTLARSANDLDSIPSPGSQEDRSEKMSPSFNIR
DMTAIFEQKSQGTG