DPGLEAN12435 in OGS1.0

New model in OGS2.0DPOGS216172 
Genomic Positionscaffold3011:- 1053-9713
See gene structure
CDS Length2331
Paired RNAseq reads  2473
Single RNAseq reads  5225
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA014157 (0.0)
Best Drosophila hit  Rs1 (5e-165)
Best Human hitprobable ATP-dependent RNA helicase DDX27 (2e-145)
Best NR hit (blastp)  PREDICTED: similar to DEAD box ATP-dependent RNA helicase [Nasonia vitripennis] (0.0)
Best NR hit (blastx)  PREDICTED: similar to DEAD box ATP-dependent RNA helicase [Nasonia vitripennis] (6e-172)
GeneOntology terms



  
GO:0003724 RNA helicase activity
GO:0042254 ribosome biogenesis
GO:0004004 ATP-dependent RNA helicase activity
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
InterPro families



  
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR001650 Helicase, C-terminal
IPR014001 DEAD-like helicase
IPR014014 RNA helicase, DEAD-box type, Q motif
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
Orthology groupMCL14046

Nucleotide sequence:

ATGGAAGTAGAAGGGCATCCAGGCCTAATCAAAACCATTAATGATGATGAAGAAGTAGAA
GATTTCTCAGAGGAATCTGATGTGGAAGAAGACTATCAGCCCACTAAACAAAAAGTTAAA
AGACAAGCAGATTTTGACCCTTCATTCAAATTTGTGGGTTCCGTTGATGAGTATAATAAG
AGTCCGTGGGATGATCTACATAAATATATCAAGAGAAATGTTAAACAAACATTAGATCAG
AAGATTGAGAAACGACGAGCTGAAGCAAAGGTCAAAGGCAATATTGATGATAGTGAATCA
GAAGGAGAGAAAGATGCTGGCCTGGATGAATTCGAAATATCTGACGATGAACTGAAGAAA
GATGAAATTAAAACAAAAACAAAGAAACTAACCAAAAAACAGATGTTAGAGGAGGAGCTA
AAGAAAGATGAAGGCGAAGGTGCTCGTATTGAGTACGATTCTGACTTCTTTGAAGAACCA
CCGCCGTATGATGAACAAGCCACCTTCTATATGATGAATCTGTCTCGGCCAATGCTGAAG
GCAATCGCATCTCTGAATTATGTGCACCCTACACCCATCCAAGCCGCGACCATACCTATA
GCTTTATTGGGCAAGGATATCTGTGCGTGTGCAGCCACAGGCACAGGCAAGACAGCTGCG
TACATGGTGCCTGTGCTGGAGCGACTTTTGTACAAACCTACTGAAAGACGCACGCGAGTA
CTGGTGCTTGTGCCTACCAGGGAACTTGGAGCTCAGGTACATACAGTTACCCGTCAGCTG
GCACAGTTCACATCAGTTACCATCGGTCTGTCTGTGGGAGGATTGGACGTCAAGTATCAG
GAGAGCGTTCTCCGTCGTCACCCGGACGTGGTGATAGCAACCCCCGGCCGGCTCATTGAT
CACGTACGGAACACTCCGTCATTCGACCTGAACTCCATAGAAGTGCTCATACTCGATGAG
GCTGACAGGATGTTGGACGAGTATTTCGCTGAGCAGATGAAGGAGATCATCCGTCAATGT
TCCCCGAAGCGCCAGACCATGCTGTTCTCAGCCACTATGAGCGACCAGGTCCGAGACCTG
GCGGCCGTCTCACTCAAGAAACCAGTCAAGCTGTTCCTTGACTCCAACAAGGATGTTGCG
TTCAATTTAAGACAGGAGTTTGTTCGTATCCGTAAAGAGCGCGAGTGCGACCGGGAGGCG
ATCCTAGCGGCGCTAGTGTGCCGTACCTTCAAGGATCGGGCCGTCATCTTCGTACAGACT
AAGAAGCAAGCTCACAGACTACACGTGGCGCTGGGACTTTTGGGAATCAAGGTGGCTGAG
CTCCACGGGGCACTAAACCAGCCCCAGCGTTTGGATTCCCTGAAGCGGTTCAGGGAGGAG
CAGGTGGACGTGCTGGTGGCGACGGATGTAGCAGCCCGAGGACTGGACATACCTGGCGTG
AAGACCGTATTGAATTTCACACTTCCAGCAACCATAGAGCACTATATACACAGGGTCGGT
CGTACCGCTCGTGCTGGCCGTGCTGGTGTGTCCGTGTCGCTGGCCGGTGAGGGCGAGCGG
AACCTGGTGAAGACAATAGTACGTCGCGCACGTCGTGCTGTGAAATCTCGCGTCCTGCCC
GCGGACATCGTAGCCAAGTATAGGGACAAACTTGCCAAGCTGGAGCCCGAGATTGCCGCT
ATACTGGACGAGGAATACGCTGACAAACAGCTGAAGAAGATGGAGAAACAGACTAATAAA
CTAGAAAGCGCCATCAAGAACGAGAAAACTGACACTCCTATGGAAGCCCCGCGACAACAC
GACTGGTTCCAGACACCGAAAGAAAAGAGAGAGGAGAAAGAGAGACTAGCACTGACAAAG
CATGTGGGCAAAGCCGAGAAAACACAGAAAGGTAAAGGAAAGAAACGGAAACACGATGAC
GACGACTCCGACGACGGAGAGAAGAAGAAGAAGAAGAGGCAGACGAAGCACGTGAAGGAT
TCAGCAGAAGAGAGAGTTAGGAAGGAAATGGAGAAGGTCGCACTCCTGCAATCGAGAATG
GCGAAACGTCAGAAGAAGCAGAAGAGAATTCGCGCGGTCGAAGACGATGACGAGAGACCA
GCTCAGAGACAGAAACAAGGGAAGAGGAAGAAGCAGACGAACTTCGCGAACGACCTCACT
GATGTATCCAAAGCGTCCACCAAGAAACTGAGATATGACGCCAATAGGGTGCAGAAAGGA
AAACCACTGCAGAACGGAAAGTTCCAGAAGGGCAAAGCGGTTAAGGGCAAGAAGGGCAAG
ACGTTCGGCAAACCGCAAGCACCGAAAAATACGAAAAAGAAAAATAAATAA

Protein sequence:

MEVEGHPGLIKTINDDEEVEDFSEESDVEEDYQPTKQKVKRQADFDPSFKFVGSVDEYNK
SPWDDLHKYIKRNVKQTLDQKIEKRRAEAKVKGNIDDSESEGEKDAGLDEFEISDDELKK
DEIKTKTKKLTKKQMLEEELKKDEGEGARIEYDSDFFEEPPPYDEQATFYMMNLSRPMLK
AIASLNYVHPTPIQAATIPIALLGKDICACAATGTGKTAAYMVPVLERLLYKPTERRTRV
LVLVPTRELGAQVHTVTRQLAQFTSVTIGLSVGGLDVKYQESVLRRHPDVVIATPGRLID
HVRNTPSFDLNSIEVLILDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSDQVRDL
AAVSLKKPVKLFLDSNKDVAFNLRQEFVRIRKERECDREAILAALVCRTFKDRAVIFVQT
KKQAHRLHVALGLLGIKVAELHGALNQPQRLDSLKRFREEQVDVLVATDVAARGLDIPGV
KTVLNFTLPATIEHYIHRVGRTARAGRAGVSVSLAGEGERNLVKTIVRRARRAVKSRVLP
ADIVAKYRDKLAKLEPEIAAILDEEYADKQLKKMEKQTNKLESAIKNEKTDTPMEAPRQH
DWFQTPKEKREEKERLALTKHVGKAEKTQKGKGKKRKHDDDDSDDGEKKKKKRQTKHVKD
SAEERVRKEMEKVALLQSRMAKRQKKQKRIRAVEDDDERPAQRQKQGKRKKQTNFANDLT
DVSKASTKKLRYDANRVQKGKPLQNGKFQKGKAVKGKKGKTFGKPQAPKNTKKKNK