DPGLEAN12448 in OGS1.0

New model in OGS2.0DPOGS209701 
Genomic Positionscaffold567:+ 28544-29356
See gene structure
CDS Length813
Paired RNAseq reads  12
Single RNAseq reads  41
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA014395 (7e-93)
Best Drosophila hit  ND
Best Human hitpiggyBac transposable element-derived protein 2 isoform a (3e-21)
Best NR hit (blastp)  PREDICTED: similar to predicted protein [Hydra magnipapillata] (5e-74)
Best NR hit (blastx)  PREDICTED: similar to predicted protein [Hydra magnipapillata] (6e-69)
GeneOntology terms



  
GO:0005044 scavenger receptor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0016020 membrane
InterPro families  ND
Orthology groupND

Nucleotide sequence:

ATGCCGCTAAAAAAGTTTGAAAAAATAAGATCCACTCTCCATTTTGCCGACGATACGCTA
TGCTTGCCCAAAGATCATCCAGACTATGACAGGCTATTCAAAATAAGACCTCTTGAGGAA
ACGCTCAACTGCCAGTTTGGGAAGGTTCCCTTAGACCAAAGGCTTTCCATAGACGAGCAG
ATGTGTGCAACCAAAATGAGTCATTACATAAAGCAATACATGCCCAATAAACCTCACAAG
TGGGGGTTTAAATTATATCTCATCTGCAGTCTACAAGGATATGCTCATAGGTTTGAGGTT
TACAGTGGAGGGGGCTCCAAAAATAACATCTTACCAGGTGAGCCAGATTTGGGAAAGTCT
GGCAATACAGTCGTCAGGATAGCTAGAATGGTACCACGCAATGTGAATCACATTATATAC
TTCGATAACTTCTATACTTCTGTGCCTCTCGTCACCTATTTAGCTAAGGAAGGAATTTTC
TCACTGGGAACAGTAAGAGTAAACCGATTGAGAAACTGCAAATTGCCTGAAAAAAACACT
ATAATGAAAAAGAACGTACCCAGAGGATTCTATGAGGAAAACGTGGCGGCTGTGGATGAT
ATTGACGTAAGTGCTGTTGTGTGGAAAGATAACAAGCCCGTTAACCTTCTTTCCACTTAC
GTAGGAGCAGAACCAGCAACCACAGTCACACGCTTTGATAAATCGAAGAAAGAGAGAGTT
GCTATTCCATGCCCCAAAGTAATCAAGGAGTACAATGCCCACATGGGAGGCGTGGACTTA
TTAGACTCATTTATAGGTTATGAAAGGAAATGA

Protein sequence:

MPLKKFEKIRSTLHFADDTLCLPKDHPDYDRLFKIRPLEETLNCQFGKVPLDQRLSIDEQ
MCATKMSHYIKQYMPNKPHKWGFKLYLICSLQGYAHRFEVYSGGGSKNNILPGEPDLGKS
GNTVVRIARMVPRNVNHIIYFDNFYTSVPLVTYLAKEGIFSLGTVRVNRLRNCKLPEKNT
IMKKNVPRGFYEENVAAVDDIDVSAVVWKDNKPVNLLSTYVGAEPATTVTRFDKSKKERV
AIPCPKVIKEYNAHMGGVDLLDSFIGYERK