New model in OGS2.0 | DPOGS209701  |
---|---|
Genomic Position | scaffold567:+ 28544-29356 |
See gene structure | |
CDS Length | 813 |
Paired RNAseq reads   | 12 |
Single RNAseq reads   | 41 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014395 (7e-93) |
Best Drosophila hit   | ND |
Best Human hit | piggyBac transposable element-derived protein 2 isoform a (3e-21) |
Best NR hit (blastp)   | PREDICTED: similar to predicted protein [Hydra magnipapillata] (5e-74) |
Best NR hit (blastx)   | PREDICTED: similar to predicted protein [Hydra magnipapillata] (6e-69) |
GeneOntology terms    | GO:0005044 scavenger receptor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0016020 membrane |
InterPro families   | ND |
Orthology group | ND |
Nucleotide sequence:
ATGCCGCTAAAAAAGTTTGAAAAAATAAGATCCACTCTCCATTTTGCCGACGATACGCTA
TGCTTGCCCAAAGATCATCCAGACTATGACAGGCTATTCAAAATAAGACCTCTTGAGGAA
ACGCTCAACTGCCAGTTTGGGAAGGTTCCCTTAGACCAAAGGCTTTCCATAGACGAGCAG
ATGTGTGCAACCAAAATGAGTCATTACATAAAGCAATACATGCCCAATAAACCTCACAAG
TGGGGGTTTAAATTATATCTCATCTGCAGTCTACAAGGATATGCTCATAGGTTTGAGGTT
TACAGTGGAGGGGGCTCCAAAAATAACATCTTACCAGGTGAGCCAGATTTGGGAAAGTCT
GGCAATACAGTCGTCAGGATAGCTAGAATGGTACCACGCAATGTGAATCACATTATATAC
TTCGATAACTTCTATACTTCTGTGCCTCTCGTCACCTATTTAGCTAAGGAAGGAATTTTC
TCACTGGGAACAGTAAGAGTAAACCGATTGAGAAACTGCAAATTGCCTGAAAAAAACACT
ATAATGAAAAAGAACGTACCCAGAGGATTCTATGAGGAAAACGTGGCGGCTGTGGATGAT
ATTGACGTAAGTGCTGTTGTGTGGAAAGATAACAAGCCCGTTAACCTTCTTTCCACTTAC
GTAGGAGCAGAACCAGCAACCACAGTCACACGCTTTGATAAATCGAAGAAAGAGAGAGTT
GCTATTCCATGCCCCAAAGTAATCAAGGAGTACAATGCCCACATGGGAGGCGTGGACTTA
TTAGACTCATTTATAGGTTATGAAAGGAAATGA
Protein sequence:
MPLKKFEKIRSTLHFADDTLCLPKDHPDYDRLFKIRPLEETLNCQFGKVPLDQRLSIDEQ
MCATKMSHYIKQYMPNKPHKWGFKLYLICSLQGYAHRFEVYSGGGSKNNILPGEPDLGKS
GNTVVRIARMVPRNVNHIIYFDNFYTSVPLVTYLAKEGIFSLGTVRVNRLRNCKLPEKNT
IMKKNVPRGFYEENVAAVDDIDVSAVVWKDNKPVNLLSTYVGAEPATTVTRFDKSKKERV
AIPCPKVIKEYNAHMGGVDLLDSFIGYERK