| New model in OGS2.0 | DPOGS209704 |
|---|---|
| Genomic Position | scaffold567:+ 72824-77552 |
| See gene structure | |
| CDS Length | 2247 |
| Paired RNAseq reads | 460 |
| Single RNAseq reads | 1199 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014401 (2e-10) |
| Best Drosophila hit | rumpelstiltskin (4e-09) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to Hrp59 CG9373-PA [Tribolium castaneum] (6e-15) |
| Best NR hit (blastx) | GD20792 [Drosophila simulans] (5e-16) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0003730 mRNA 3'-UTR binding GO:0000166 nucleotide binding GO:0005634 nucleus GO:0005737 cytoplasm GO:0008298 intracellular mRNA localization GO:0008595 anterior/posterior axis specification, embryo |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL40966 |
Nucleotide sequence:
ATGGATTCAAATGAAAATAACCAAAGTGACCAGGTGAAAGCTTTGGAATCATCGGTATTA
AAATCAGAAGCTGTGAAAGAAGAGCCAGAAGACAATGAAAATTCTGAACTCTCAAATTAT
AACAACGTTGAAAAAATAGATGTTGATGCTAATCCGAGTAATTTACCATCAAATGGCCAG
AAACGTAAGAGCCCCGAGAAATCATTGCCGGAGAACGATTGTAATGATAACCCAAATAGC
ATAAAAAGAAGGAGGTATACTGACACGCAAACTGAGGATCAGGTCGACCCTAGTATAGAA
GAGGAGCCAAAGTTCTCTTTGATAGTGAGGAATGCAAGTTGTGACTGGACATCACAACAG
GTTCTCAACTTCATCAGGGATACTTGTGGTGTTCACATATCGAAAATAAACGACAGTAGA
GAGGGCAACACGGATTCAGATTTTCAAATTAAACTGAATTTTGCTTCCAAGGAACAACTT
GATACAGTTAGGGAGAAATTAAGAGAGAAAGAGTTTGAAGGAAAACTGACTATCGCAATT
GAGAGCGAAATGGTTGAGGGGGCACAAGAAACCAAAGATGAAAGAGACAGCGAGGCTGAC
TCCAACGTTACCACCGGAATAGAAGATAGAGACTCACAAAATGTTGAAAGTCCATCAAGA
AATAACGAAGAACACGAAACTGAGTCGAACGATTTCCACATAAAGGAAGATTATCTTCGT
TCGTTAGGGATTTTGCCACCTATCACTAATTGGGTTGATGTCACGAATTTTCGCTGTGAT
AAATCAGAGTTGAAGGAAGTATTGGAGTTGGCAGGTAGGGTAGTAATGTGCTCTGTTGTC
ACATCTCTGCACAGATATGCCAATGCTATGTACAGCCACCCTCTGGAAGCTGTTCAGGCA
GTGTCAATGCTTAATGGGCAAATATTCTACGGGAAAAAACTTAAAGTCACTATAAACAGA
TCCCCTAACGTTAAAACCTTGTTGCCCAAAGGTCTTGTAAGTGTAGGGCCGGGCTTAGGC
AAATTCGGAAAACCGGTTCGAGATTTACCTGATCAATACAAAAGATTCATCCAAGGACAA
AACTCTGCGATTGATGCGAGTTTGTTCCAACCAGACCTTCTCAATAGAATCGGGGTGACC
CTCGATCGGGACATTAATTATTCACGTTCCTCCGGGACTCCTTATAGTCAAAGTAGCCAA
ACCGATTTATGCACAAGAAACAGTGCTGATTCCAGTGAAAGTTTGTCCCAAATTTCGCAC
ATGGATGAAAATCAATTTGGTCCTATCGGACAAAAACCGAGTTTCCATAATACGCCTTTG
ACGAATTTTACTGGGCAAAACTGTTCTGTCAATATTAATTCTAATGGCTCAAATATTTCA
GCGAATCGAATGCCTGTCATGACTACCAGGGATCCTAGAAGCAACCAGAATTACATTTGT
CCCCCAGTATCAAACGATTCTGATAGACTTGTTATTACCTCTGCTGTTATAAATCCCCAA
CATCCCGTTTCGGGGCAAATCAGAGGACCGGGTGCTATTCAGAATGCGGGTCGTGTTTTG
GGGATAGCCAGTTCTGGGTCTATACCAGGTTCGGGTCTAATAAATTATCCTGGACCTATG
ACAAACTCTGGTCCGATTTCTGGACCTAACCCCATGCCAGGGCTCGGACCTCTGTCTGCT
TCTGGTCCTATGCCTAGGCCTGGTGTTATTCGCGGTCCCATGTCTATGCCTGGCCCTATT
TCAGGTCCTGGACCTTTATCAGGACCCGTTCGCGTCCCTGGTCCTGGAAATCTTCAATTA
AGACATAGTCCTATTTCTGGATGTGCAAGACCTATGGCTCAAGGTCATCCTTCTGGACCA
TTACAATTAACAGGTCCAAGATGCCCACGACCCAATCAAATGGTTCATATTTCAATAGGC
CCTAGAGTACCAGCACCATTAAATAGATTCCCCACTCCTATAAGTCCTATGGCATCAAGG
CCTTTGGCACCTAGCGCACCTGTTCAGAACGCGATAAGACCAAATGGACCACGTCTGATG
ACCACAAACGTTCAAATGTTCAGAAGCGATCCGGTCACACTACAAATAAGCAACTTGCCA
CCGAATACGAATTTCCTGAATCTCGGTCACAAATTATCTGAACTAGGTCACGTAGTGTAC
TTGGAGTTCACAACACCTGGATGTGCTGTTGTGAGGTTCGCGAACCCAGCTGATGCTGAT
AGATGCTTTCGTATCCTTTGTGTATAA
Protein sequence:
MDSNENNQSDQVKALESSVLKSEAVKEEPEDNENSELSNYNNVEKIDVDANPSNLPSNGQ
KRKSPEKSLPENDCNDNPNSIKRRRYTDTQTEDQVDPSIEEEPKFSLIVRNASCDWTSQQ
VLNFIRDTCGVHISKINDSREGNTDSDFQIKLNFASKEQLDTVREKLREKEFEGKLTIAI
ESEMVEGAQETKDERDSEADSNVTTGIEDRDSQNVESPSRNNEEHETESNDFHIKEDYLR
SLGILPPITNWVDVTNFRCDKSELKEVLELAGRVVMCSVVTSLHRYANAMYSHPLEAVQA
VSMLNGQIFYGKKLKVTINRSPNVKTLLPKGLVSVGPGLGKFGKPVRDLPDQYKRFIQGQ
NSAIDASLFQPDLLNRIGVTLDRDINYSRSSGTPYSQSSQTDLCTRNSADSSESLSQISH
MDENQFGPIGQKPSFHNTPLTNFTGQNCSVNINSNGSNISANRMPVMTTRDPRSNQNYIC
PPVSNDSDRLVITSAVINPQHPVSGQIRGPGAIQNAGRVLGIASSGSIPGSGLINYPGPM
TNSGPISGPNPMPGLGPLSASGPMPRPGVIRGPMSMPGPISGPGPLSGPVRVPGPGNLQL
RHSPISGCARPMAQGHPSGPLQLTGPRCPRPNQMVHISIGPRVPAPLNRFPTPISPMASR
PLAPSAPVQNAIRPNGPRLMTTNVQMFRSDPVTLQISNLPPNTNFLNLGHKLSELGHVVY
LEFTTPGCAVVRFANPADADRCFRILCV