| New model in OGS2.0 | DPOGS214241 |
|---|---|
| Genomic Position | scaffold136:- 9156-47638 |
| See gene structure | |
| CDS Length | 1650 |
| Paired RNAseq reads | 534 |
| Single RNAseq reads | 3415 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005962 (4e-18) |
| Best Drosophila hit | muscleblind, isoform F (3e-71) |
| Best Human hit | muscleblind-like protein 1 isoform a (1e-54) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014149 [Tribolium castaneum] (5e-133) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014149 [Tribolium castaneum] (1e-126) |
| GeneOntology terms | GO:0007517 muscle organ development GO:0009790 embryo development GO:0005634 nucleus GO:0001751 compound eye photoreceptor cell differentiation GO:0003676 nucleic acid binding GO:0007422 peripheral nervous system development GO:0007525 somatic muscle development GO:0003677 DNA binding GO:0045924 regulation of female receptivity GO:0008270 zinc ion binding GO:0006915 apoptosis |
| InterPro families | IPR000571 Zinc finger, CCCH-type |
| Orthology group | MCL12962 |
Nucleotide sequence:
ATGGTGAACATGAACAGCCTTCTGAACGGTAAAGACTCGCGTTGGCTGCAACTCGAAGTA
TGCAGAGAGTTCCAACGGAATAAGTGCTCGCGACCTGACACCGAGTGCAAGTTCGCACAT
CCTCCGGCCACTGTTGAAGTACAGAATGGAAGAGTAACTGCCTGCTACGACAGTATCAAG
GGACGGTGTAACCGAGAGAAACCACCCTGCAAGTACTTCCACCCCCCGCAGCATCTTAAG
GATCAGCTGTTGATTAACGGTCGGAATCATCTAGCATTAAAGAACGCCCTGATGCAGCAG
ATGGGCCTTACGCCGGGCCAGGTGCTTCCTGGCCAGGTCCCAGCAGTTGTGGGCGGCGTG
AGCGGCGCGGGTGCGGCCGCCAGCCACATCGCGGCCCTGGACCCGATCAGTCTCGCCCTG
CTCGCCCCGCAGGCAACATCACCTTACTTATCGGGTGTGCCCGGAGTGGGCTCGACGTAT
GCTCAATACTATGCGCCGCAGCTGGTTCCGGCTGTGTTGGGTCACGACCCGTCCGCCGCA
GCCGCCTCGCCACTAGGAGTCATGCAGCAGCCCGTATTGCAGCAGAAACTGCCGCGTACT
GACCGTCTTGAGGTGTGCCGGGAGTTCCTGCGCGGCGCGTGCAAGCGGGCCGAGTCCGAG
TGTCGCTTCGCGCACCCGCCGCCACCGGTGGTCGCTCACGACGACGGCTGTGTCACGGTG
TGCATGGACGCCGTCAAGGGCCGCTGCGTCCGCGACCCCTGCCGCTATTTCCACCCTCCC
CTGCACCTGCAGGCGCACCTTAAGGCGCAGGCGCGCGGCGCGATGGACATGAAAAGCGTC
GGTTCCTTCTATTACGATAACTTCGCCTTTCCCGGTGTGGTCCCGTACAAAAGACAAGCT
GCTGACAAAGCCGGAGTTCCCGTATACCAGCCGGCGACTACTTACCAGCAACTGATGCAG
CTGCAGCAGCCATTCGTGCCCGTGTCATGTGAGTACCCCGCGCCCGCCTCGTCCGCCCCG
CCGGCCGCGGTGACTGCGGTGTCGGGCGCCGCAGGACCCCAGACGGCGCCCGCGGCCGTC
CGCCGCGCAGCCCGCTCCTCCCGCGCCCGCCTCGCCACCCGTCTCCGTTGCCGACGCGGC
TGTACCGGACCCCGCCGCCGTCGCCAAAGAGGTCGCTCACAAGAATTACGCGGCCGCGCT
CGCGCTCGCCGCACAGCACTCCGCCATGGCACACGCGGCCGCCGCCTACACACAACAGGC
GTTCAAGGCCCGTGCCGCCATGCCGGGGTTGATGCGCGCACCGCTCATGATGCGGCCGGG
TTGGCCCGCGCCGCCCGTGCCCATGCCCGCCTTCTATCAGCAGCCTTACATGTACGCGAT
GCCCCCGCCCGCGGCACCGTCCGCAGCCGCGGCGGGGGCGGCGGCGGCCGCTGCAGTCAA
CCCCTACAAAAAGATGAAGACGACCTAAGACGCGCGGGCGGGCCGCGGCCGGAGGGGCGC
GGGGTGCGGGGTCTCCGCGTAGAGACTCGTACGTGTGCGATAGTGTGGCCCTGGCCTGTC
GGGGCGTTAGCGCTAGGCGTGTTGTCACATTTGTATTGTATTATTGTAAGGACGAAGCGA
GCGATTCCCGTCTCGCGGAAGTCTAGGTAG
Protein sequence:
MVNMNSLLNGKDSRWLQLEVCREFQRNKCSRPDTECKFAHPPATVEVQNGRVTACYDSIK
GRCNREKPPCKYFHPPQHLKDQLLINGRNHLALKNALMQQMGLTPGQVLPGQVPAVVGGV
SGAGAAASHIAALDPISLALLAPQATSPYLSGVPGVGSTYAQYYAPQLVPAVLGHDPSAA
AASPLGVMQQPVLQQKLPRTDRLEVCREFLRGACKRAESECRFAHPPPPVVAHDDGCVTV
CMDAVKGRCVRDPCRYFHPPLHLQAHLKAQARGAMDMKSVGSFYYDNFAFPGVVPYKRQA
ADKAGVPVYQPATTYQQLMQLQQPFVPVSCEYPAPASSAPPAAVTAVSGAAGPQTAPAAV
RRAARSSRARLATRLRCRRGCTGPRRRRQRGRSQELRGRARARRTALRHGTRGRRLHTTG
VQGPCRHAGVDARTAHDAAGLARAARAHARLLSAALHVRDAPARGTVRSRGGGGGGRCSQ
PLQKDEDDLRRAGGPRPEGRGVRGLRVETRTCAIVWPWPVGALALGVLSHLYCIIVRTKR
AIPVSRKSR