| New model in OGS2.0 | DPOGS202396 |
|---|---|
| Genomic Position | scaffold1975:+ 6283-15053 |
| See gene structure | |
| CDS Length | 1332 |
| Paired RNAseq reads | 113 |
| Single RNAseq reads | 254 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001779 (2e-13) |
| Best Drosophila hit | CG5245 (1e-11) |
| Best Human hit | PREDICTED: zinc finger protein 208 (1e-12) |
| Best NR hit (blastp) | zinc finger protein 57 [Homo sapiens] (1e-16) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 57-like, partial [Pongo abelii] (5e-22) |
| GeneOntology terms | GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005622 intracellular GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGTTACAGATGGCCTATCAAGAAAACCTCCGGCTATGCTATGAATGTGCAGCTCTGCTC
GTTAAGTTCGCGTCTTTCAAGGAACAGGTCATGCGATCATATAGAGACTACAACGACTTC
ATAACGAATCCATTGCAACCTATACAACCGATATCAAGGCTGCAAGCAAAAAAATTACAC
GACCTATCAAACGGACAAACGGACGTATATGAGGATCCGCCGGAAGTTAAGTCTGAGGAA
ACGGAAGTTGAGGTCAAAAATGTATATAAAATAGAGTCGTTGAAGACCAGAAACATGCAA
GAGACGAGAGAGTACACACAGGTGGAGTTGACGGGAGATGAGATAGAGGAAGAAAGGAGA
TTGTTGGAGATGGGAGAAGATTACGTGAACGCTATGTTCAGGTGCGAGAAATGTATCGCG
ACGTTCCCTAACTCCGAGGACCTGGAAGATCACACAACTAACAAACATTTGCTGAACGCG
TCCAATTATAAATGCTCGATATGCCAGTGCACCTTCGCCACGGAGTTCTCGTATAACTAC
CACACAAACAAACACACGACCAGATACGAGTGCAGTGTGTGCAAACAGCGCTTCGTGAAC
AAGCGCGACGCGGCGCGCCACTACAGCATCACGCACTGCGTCGGAATGGACGTGGAGGTG
AAGAACAACGACGAGGATAACAATGAGTCAAGAGGTCAAGACGGCATCCAGCACCCCTGC
GAGTTCTGCCCAAAGACGTTTAAGTGGAAGACGTCTCTAAGAAAGCACCTGGAGACTCAC
AGCATCGAGAACGGACAGAAGAGGAAGCCGTACTGCACTCCCTGCAGGTTATCGTTCACG
ACGACGTCCAACCTTCAGAAGCACGTGCGCACAAGTTCGAAACACCAAATCCAGTTGAAG
CTAAGGAAACTGAAAGAAATGAACAGTTCACATGAAAAACAAGAAAATATCAAGGAAAAG
ATAAACGAGATCAAATCATCAGTTAACAACTCGAGACACCAGTTCCCTTGCAACCAATGC
GACAAACGGTTCCTATGGAGGGGCAACCTGTTGAGGCACCTGCAGAGTCATTTAGCTAAG
TTGGTATTCAAAACAAGCAACTCCGTGTATTTACACAAACAGGCGGTCCACAGGAAGGAC
GTCATCGAGCATCTGTGTGATCACTGCGGGAAACCATTTCCGAACGGTGCTAAACTCCGC
GCCCACATCCTCGGCGCCCACGGAGTGTCCGAGCATGCTTGTGGTCGCTGCGGGGCGAGC
TTCGCCTGGCATTCGTGTTTGTCAAGACATGTTAGACAAAAACACAGAGGAGGCAGAGTA
AACGGTGATTAA
Protein sequence:
MLQMAYQENLRLCYECAALLVKFASFKEQVMRSYRDYNDFITNPLQPIQPISRLQAKKLH
DLSNGQTDVYEDPPEVKSEETEVEVKNVYKIESLKTRNMQETREYTQVELTGDEIEEERR
LLEMGEDYVNAMFRCEKCIATFPNSEDLEDHTTNKHLLNASNYKCSICQCTFATEFSYNY
HTNKHTTRYECSVCKQRFVNKRDAARHYSITHCVGMDVEVKNNDEDNNESRGQDGIQHPC
EFCPKTFKWKTSLRKHLETHSIENGQKRKPYCTPCRLSFTTTSNLQKHVRTSSKHQIQLK
LRKLKEMNSSHEKQENIKEKINEIKSSVNNSRHQFPCNQCDKRFLWRGNLLRHLQSHLAK
LVFKTSNSVYLHKQAVHRKDVIEHLCDHCGKPFPNGAKLRAHILGAHGVSEHACGRCGAS
FAWHSCLSRHVRQKHRGGRVNGD