| New model in OGS2.0 | DPOGS214264 |
|---|---|
| Genomic Position | scaffold11368:+ 139-4303 |
| See gene structure | |
| CDS Length | 1416 |
| Paired RNAseq reads | 104 |
| Single RNAseq reads | 289 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005984 (2e-51) |
| Best Drosophila hit | eyes shut (7e-36) |
| Best Human hit | slit homolog 3 protein precursor (1e-08) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010461 [Tribolium castaneum] (2e-69) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010461 [Tribolium castaneum] (3e-39) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0005509 calcium ion binding GO:0042052 rhabdomere development GO:0005615 extracellular space GO:0010378 temperature compensation of the circadian clock |
| InterPro families | IPR012680 Laminin G, subdomain 2 IPR008985 Concanavalin A-like lectin/glucanase IPR001791 Laminin G domain IPR000742 Epidermal growth factor-like, type 3 IPR013032 EGF-like region, conserved site IPR006210 Epidermal growth factor-like IPR013320 Concanavalin A-like lectin/glucanase, subgroup |
| Orthology group | MCL40017 |
Nucleotide sequence:
GGCGGTCACCCATCCGATGACTTCCGCGACCTGCCCCATGACCTGCCCCTGCACAGCGGG
TGGTCGGGGTGCGTGTTGGAGGTCACGGGTCAGTCAGGGGGAGGACGGGGGGTCGGCGGC
CGGGGCGTGGGCCAGTGCGGGGTCACTCAGTGCACCGCCAAGTCCTGTAACGCACCCCGC
GGCGTCTGTATACACTCCCCCGCCACTTACGGATGCATCTGTAACGAAGGCTGGTTCGGT
GCGACCTGCGCCAGCCCTCGCAGTCCGTGCGATCGATCGCACTCTCGCTGCCAAGGTGCC
TGTGTCATTACACTCACTGACGCACACTGTGACTGCCCTTACGGCAAGTCTGGACCTAAC
TGCGATCAAGAATTAATACCAATCGATGTTCTATTCACCGGCGCTAGATCCTATCTGAAG
CTGAAAGCTAGATCTATTTCTAGTGTGAGCTTAGCTCTGGAAGCGGAAATTAAACCTCAA
AAGGAGAGGGGATTGATTGTATTCGTCGAAACGCCGCATTTCTATACGTCGCTTTCGCTT
CAGGGTGGTTTGTTGGAGTATAGATGGACGGATAATTTGTCCGGTCTGACGTCACTGGTC
CGCTCGGGGGTGGTGGTGTCGGTGTCACAATGGCACGGCGTGAGGGCGGGTCGCTATGGC
AACCGGCTGTATGTGTGGGTAGACGGCGCCCTCAGTGGTATGAGAGATCTGTCTCGGTTA
CCGTTGGATGTTATGTCCGGCCCTCCTGAATCCTACAGCGGCTGCTTTAGGAACTTCCAT
CTAAATAATATATTGTTACCTCTCGAACAACAAAATATAGAAGAGGGTCAAAACGTGCTA
GCGTGTGAAGGGTCTAGTTGCGGCGCTCGTTGTAGACGAGCGGCATGTTCCCGCGACACG
TGTGCGGGGAGGTGTCGGCGCGGACGCTGCGTGTGTCCGGCGGGACGGGCGGGTGTTACT
TGCAGGGAACATATAAACATAACGATACCTCAATTCGGAGGGGACGCCATGTTGACACTC
AGTCGGAGCGATCGTCGAGAACAATTGATTGAAGCGTCACCCGCTCGAATAAAACTCAAC
TTCAACACCGCGGACCCGAACGGGCTCATAGTTTGGATCAATACGGGTATAGACTACTTC
GGCGTTGGTCTCGAGAACGGATATATTAAACTTAGTTGGTCTGTACATTGTAACAATTCA
AGTGGTCAAACTACGAGAGACTATTTTCCGTTACCACCAAAACTAACTCCGACTCTGGTC
AGTGCGGGCTTCTTGGCGGACGGAGAGTGGCATTCGATTGCATTGACCCTAAGACATAAC
ATCTCTTTGTCTATCGACGAAAAGTTATTCGTTGATCAAGAATGCATTCAAATTGAAGAC
GATGATGACACTGAGTTATTTATAGGTGAATTTTAA
Protein sequence:
GGHPSDDFRDLPHDLPLHSGWSGCVLEVTGQSGGGRGVGGRGVGQCGVTQCTAKSCNAPR
GVCIHSPATYGCICNEGWFGATCASPRSPCDRSHSRCQGACVITLTDAHCDCPYGKSGPN
CDQELIPIDVLFTGARSYLKLKARSISSVSLALEAEIKPQKERGLIVFVETPHFYTSLSL
QGGLLEYRWTDNLSGLTSLVRSGVVVSVSQWHGVRAGRYGNRLYVWVDGALSGMRDLSRL
PLDVMSGPPESYSGCFRNFHLNNILLPLEQQNIEEGQNVLACEGSSCGARCRRAACSRDT
CAGRCRRGRCVCPAGRAGVTCREHINITIPQFGGDAMLTLSRSDRREQLIEASPARIKLN
FNTADPNGLIVWINTGIDYFGVGLENGYIKLSWSVHCNNSSGQTTRDYFPLPPKLTPTLV
SAGFLADGEWHSIALTLRHNISLSIDEKLFVDQECIQIEDDDDTELFIGEF