| New model in OGS2.0 | DPOGS208317 |
|---|---|
| Genomic Position | scaffold906:+ 88277-91345 |
| See gene structure | |
| CDS Length | 1050 |
| Paired RNAseq reads | 491 |
| Single RNAseq reads | 1180 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002208 (5e-112) |
| Best Drosophila hit | mitochondrial ribosomal protein L1 (2e-80) |
| Best Human hit | 39S ribosomal protein L1, mitochondrial precursor (3e-14) |
| Best NR hit (blastp) | GL23426 [Drosophila persimilis] (5e-94) |
| Best NR hit (blastx) | GG24696 [Drosophila erecta] (1e-83) |
| GeneOntology terms | GO:0006412 translation GO:0005762 mitochondrial large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0003723 RNA binding GO:0006396 RNA processing |
| InterPro families | IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich IPR002143 Ribosomal protein L1 |
| Orthology group | MCL14346 |
Nucleotide sequence:
ATGGCTGGAATAATATTTCGTTCCTTATTCAATACATCTTTAACATTGAATAAAACTAAT
ATAACAACAATAAGATCCATTAACATCGGCGCAGTATACTATGCGGCTCGTAAGGGAACG
AGGGCGAAAGCGAGGGCAAAGAAAGTTAAAGTAGAAATTACAAAAGTCGGTTTTATACCA
CACAACCAGAGAGGAAAAAATAAAGACACAAAGATACATGTTAATAAGCATTTAGATGAT
TCGAACAAGCAGATATCGAAGGATGATGTTTACCCAATGCGGTATTATCGTTGGGTAGTG
TACACCGCCGAGGAGGCTGTCCTCGCTCACAAGGAAACTCACCATCCAACCATGTACAAT
GTACCCGATGCACTTGTCTTTGCTCAAGTTGAATTAAATATGGAGGCCGTTAAGAAGAAC
CGCTACATAGATAACTTCTCCCGTCTAACGCTTCTGCCAAGGATCTTCCCTCGTGATGAG
GAGCGTACTATCCTCGCTTTCTGTAAGGGTCCGGAGCTGATCAAACAAGTGGCGGAGGCC
GGCGCCACCACCGCCGGCAGTACAGAACTCGTCAAGAAGATACAGGAAGGTTCATTAAAG
CTCAGCGACTATGACTATGTGATAGCTCATCCTAATATACTGACGGAACTGGTGCCAATA
AGGGGTCTGATGAAGAGAAGGTTCCCCAGTCCCAACAACGGTACACTGGACGCTAATATA
TGTGATTTGGTGAAGAAGTTTGCCGCCGGAGTACAATACAGAGTTGTTAAGGATGAACAC
CAACAGAATTTTGGGTCTGTTGAAGTGCCAGTTGGGAGGCTGGACATGGACGCTCAACAT
ATTGTAGAAAATGTTGATGCATTGTTGAAAGATATTCAGTCGGCGCGACCGAAGCGAGAG
GGTCTTTTTATAACCAGGTGTTTTATTACAAGTCCGCCCTCAAGCGAGAAACTCAAGATA
GATCCATTTGTTCATGTCGACCGAACACTATCTAAGGAAGTACAAGAAGACAGTGATGAT
GAGGATGAAGCTGTAGCCGCGAGATCATAA
Protein sequence:
MAGIIFRSLFNTSLTLNKTNITTIRSINIGAVYYAARKGTRAKARAKKVKVEITKVGFIP
HNQRGKNKDTKIHVNKHLDDSNKQISKDDVYPMRYYRWVVYTAEEAVLAHKETHHPTMYN
VPDALVFAQVELNMEAVKKNRYIDNFSRLTLLPRIFPRDEERTILAFCKGPELIKQVAEA
GATTAGSTELVKKIQEGSLKLSDYDYVIAHPNILTELVPIRGLMKRRFPSPNNGTLDANI
CDLVKKFAAGVQYRVVKDEHQQNFGSVEVPVGRLDMDAQHIVENVDALLKDIQSARPKRE
GLFITRCFITSPPSSEKLKIDPFVHVDRTLSKEVQEDSDDEDEAVAARS