| New model in OGS2.0 | DPOGS208319 |
|---|---|
| Genomic Position | scaffold906:+ 114234-126260 |
| See gene structure | |
| CDS Length | 2874 |
| Paired RNAseq reads | 1961 |
| Single RNAseq reads | 5900 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002214 (0.0) |
| Best Drosophila hit | CG34133, isoform B (0.0) |
| Best Human hit | WD repeat-containing protein 44 isoform 1 (9e-180) |
| Best NR hit (blastp) | PREDICTED: similar to wd-repeat protein [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to wd-repeat protein [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0010008 endosome membrane GO:0005829 cytosol GO:0005768 endosome GO:0048471 perinuclear region of cytoplasm GO:0016020 membrane GO:0005794 Golgi apparatus |
| InterPro families | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR020472 G-protein beta WD-40 repeat |
| Orthology group | MCL14504 |
Nucleotide sequence:
ATGGACGACAGTAGCGATTCTGAAGAGTTTTTTGATGCTGAAGAATTCACGCCTGTCAAG
GGTTCGAAGAGATCCTCATTATGTAAGAGTATCAGTTTGTCAGAGAAGAGTAATGGTGAA
GATAAAACGAGCAAAGCTGAAGAGACGCCACAAGTGGTTGCAGCCAGCACTCCCATAGAA
ACAGTTCAGGAAGATAGGAATACAGTCAAAAATGTGGTGCAAGAAAGACGACGCTTCCAG
GAGTTGAGGAGATGCATGCAGACGGAGGAGGAAGATGAGCCGGAGGCGGGGGCACCACTG
GCAGCACCCATGGAACACCCCTTCAAAATAATATCACACGACACAATGAGTCTTCAGAGC
ATGACGTCACTTGGTAGGATCGGGAGAATTCTAAGCGGAGCCGCTGAATCGCATCCGAAT
ATCCGAGATTCCACGCACACAGTGACCGCGCCCCGGGAACTCTCACACATCACTGACGAA
CCCATCATGGTGGATAGGACGCAAAGCGTGGAGCCGGATGTGATCGCCAGCACCAAGGCG
AACAGTTTGAAGGTATGCCGCGGGACCACCGTCAGCGTTAGCGCCCCACGAGCTGGTCCT
ATAGCGCCACCTAGGAGAAGAAAACGAAACAAACTTCACGGCTCCCAATCCCTGTCTACG
ACCGACGGGGACAATCTCAGCGTCTGCACAACAGACACTGATGATATCGGTTACATGAGG
AGGATAGACAAACCGCAGCTAGAGACTCTGATTGTCGAGCCAGCGTCTTCGGTAAGCGCG
GCGTTACCGAGTCCCGCCAGCACCATCGAGTCGCTCACCAGAGAGTTCAGAGACGAACTG
GAACTGTCCACCAAATACGCGGATTCTTCAATAACTCGCGAGTCTCGTGATTCTACTCTG
AAGCCCCATTCCACGTTGGACATTCGGGAGGCCGTCAAAGGAGATTATGTGGTGAAGCCT
CAGGATGAAGAGAAAGCTTATAGTGGTGATAGTATCGAGGCCTCTTGCGGTACCGGCAGG
ACTCACAGCGAGGGCCGGCCGCCGACGGGCACCTCCAGCTTAGGGTCGGTCTCCAAACGT
ACAGAGTGCCGCGCACGTCGGCGCTCGGCCGGGGATTCCCCTCAGCACGCCGCGCGACCG
CTCTCAGACATGGAAATACTGGAACAGGTCACCGTGCTCAACCTGGACACAGGTGAGCGC
ATGCCTCTCAGCGTGGCCGAACACAAGCTCCCTCAGTGCATCAACCCTCTCAGTCTGCAC
ATCATGAGGCTCACTTCGGAGTACATCGGGCGGACGAACGACGGCGAGAACACCAGAGAA
ACTGATGAAGAGAGTGAGAGTGTGTGTGTGGGGGCGGAGCAGGAGGCCAGGGACGCCGGC
AAGGAGGGCGCGGACCGACCCACCGGCATCAAGAGGCGGACAGACAAGTTGAAGCGTTTC
TTCGGTTCCACGGTGAAGAAGACCGTGGACGCGGCCAAGTCCCTGGCGCAGGAGGTGTCC
CACGCGCGTCACAAGGAGGACGTGGCGGACATAGTGGACGAGGTCAGGGGAGAGCATAAC
GTTAAACTGAAGGCCTCTAACTCACACAAAGGACCTTACGACTTCGACGGATGTGTCAGA
TATGTTCAGGAGATGGGTTCGGCGCACGCCGGGGCGGTGTGGTGTTGTAAGTTCAGCGTG
TGCGGGCGATTGCTGGCCACGGCGGGCCAGGACCGGCTACTGAGGATCTGGGTCACCAGG
GACGCCTACCACCTGTTCCAGGATATGCGAACCAAATACAACGCAGAGAAGAAATCCTCG
CCGACTCCTTCCCAGGAGTCCCTGCCGTCTATGGCGGCGCCACCCCCGTCCCCGGAGGAC
ACGCCCCTCGGCCCCTCCGCCCCCTTCTGTCCCAAGCCGTTCTGCACGTACTCCGGCCAC
ACGTCCGACCTGCTGGACGTGTCGTGGTCCAAGAACTACTTCGTGCTATCCAGCTCCATG
GACAAGACGGTCAGGTTGTGGCACATCTCCCGGGGCGAGTGTCTGTGCTGCTTCCAACAC
ATCGACTTCGTGACCGCCATCGTCTTCCATCCGAGGGACGACAGGTACTTCCTCTCGGGC
AGTCTGGACGGGAAACTGAGGCTGTGGGACATACCCGATAAGAAGGTGGCCGTGTGGAAC
GAGGTGGACGGCAAGACGAAGCTAATAACGGCAGCAAACTTTTGTCAGAACGGCAAATTC
GCCGTGGTCGGGACGTACGACGGCAGGTGCATCTTCTACACGACGGACCAGCTGAAGTAT
CACACGCAGATAGACGTGCGCTCCACGCGGGGCAAGAACTCCACGGGACAGAAGATCAGC
GGCATAGAACCCATGCCCAACGACGACAAGATACTCGTCACCTCCAACGACAGCCGCATC
AGGCTCTACGACCTGCGGGACCTCAACCTGTCCTGCAAGTACAAGGGATACGTGAACGTG
TCCAGTCAGATAAAAGCGTCTTTCTCCCACGACGGGAAGTACATAGTCAGCGGCTCCGAG
AACCAGTGCATCTACATCTGGAAGACCTGCCACGACTACTCCAAGTTCACGTCCGTGAGG
AGGGACAGGAACGACTTCTGGGAGGGCATCAAGGCGCACAACGCGGTGGTCACGTGCGCT
GTGTTCGCGCCCAACCCCGACCACATGATACGGACCATCACGGAGCGCGAGGAGCGCGGC
AGGGCAGCCAGCGGCGCGGCCGGGGACGCCGGGGACGCCAAGGGCGAGGGTCTGGTCTCG
TCGTCGCAGGCCGGTCACGTGCTGGTGAGCGCCGACTTCAGCGGGGTCATTAAGGTGTTC
GTGCACCGGGCGAGACCCAAACACAGCTCGCTGCCGGCCTCCGCGCTACAGTAG
Protein sequence:
MDDSSDSEEFFDAEEFTPVKGSKRSSLCKSISLSEKSNGEDKTSKAEETPQVVAASTPIE
TVQEDRNTVKNVVQERRRFQELRRCMQTEEEDEPEAGAPLAAPMEHPFKIISHDTMSLQS
MTSLGRIGRILSGAAESHPNIRDSTHTVTAPRELSHITDEPIMVDRTQSVEPDVIASTKA
NSLKVCRGTTVSVSAPRAGPIAPPRRRKRNKLHGSQSLSTTDGDNLSVCTTDTDDIGYMR
RIDKPQLETLIVEPASSVSAALPSPASTIESLTREFRDELELSTKYADSSITRESRDSTL
KPHSTLDIREAVKGDYVVKPQDEEKAYSGDSIEASCGTGRTHSEGRPPTGTSSLGSVSKR
TECRARRRSAGDSPQHAARPLSDMEILEQVTVLNLDTGERMPLSVAEHKLPQCINPLSLH
IMRLTSEYIGRTNDGENTRETDEESESVCVGAEQEARDAGKEGADRPTGIKRRTDKLKRF
FGSTVKKTVDAAKSLAQEVSHARHKEDVADIVDEVRGEHNVKLKASNSHKGPYDFDGCVR
YVQEMGSAHAGAVWCCKFSVCGRLLATAGQDRLLRIWVTRDAYHLFQDMRTKYNAEKKSS
PTPSQESLPSMAAPPPSPEDTPLGPSAPFCPKPFCTYSGHTSDLLDVSWSKNYFVLSSSM
DKTVRLWHISRGECLCCFQHIDFVTAIVFHPRDDRYFLSGSLDGKLRLWDIPDKKVAVWN
EVDGKTKLITAANFCQNGKFAVVGTYDGRCIFYTTDQLKYHTQIDVRSTRGKNSTGQKIS
GIEPMPNDDKILVTSNDSRIRLYDLRDLNLSCKYKGYVNVSSQIKASFSHDGKYIVSGSE
NQCIYIWKTCHDYSKFTSVRRDRNDFWEGIKAHNAVVTCAVFAPNPDHMIRTITEREERG
RAASGAAGDAGDAKGEGLVSSSQAGHVLVSADFSGVIKVFVHRARPKHSSLPASALQ