| New model in OGS2.0 | DPOGS206090 |
|---|---|
| Genomic Position | scaffold3537:+ 10035-11516 |
| See gene structure | |
| CDS Length | 624 |
| Paired RNAseq reads | 59 |
| Single RNAseq reads | 442 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004988 (5e-74) |
| Best Drosophila hit | CG6178 (6e-44) |
| Best Human hit | long-chain-fatty-acid--CoA ligase 1 (2e-17) |
| Best NR hit (blastp) | PREDICTED: similar to CG6178-PA [Apis mellifera] (5e-48) |
| Best NR hit (blastx) | PREDICTED: similar to CG6178-PA [Nasonia vitripennis] (3e-48) |
| GeneOntology terms | GO:0001676 long-chain fatty acid metabolic process GO:0004467 long-chain fatty acid-CoA ligase activity GO:0046949 fatty-acyl-CoA biosynthetic process GO:0045289 luciferin monooxygenase activity GO:0006637 acyl-CoA metabolic process GO:0004321 fatty-acyl-CoA synthase activity |
| InterPro families | IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | ND |
Nucleotide sequence:
ATGACGACAATAGTGCCACCGCTCGCTGTGTTCCTTGCCAAACATCCGTTGGTCTCCAAG
TATGACCTGAGCTCATTGAACGAAATGTGGTGCGGAGCCGCCCCCCTGTCCAAGGAAATA
CAGACGCTTGTCACTAAACGAACTGGTATTGATTTCATCAAGCAAGGTTACGGACTGACA
GAAGTCACAATGGCCTGTTGTGTGGATTTAGTTGGCAGAAGCAAAGCAGGCTCCTGCGGT
ACACCTGCGCCTGGCATGAAGATCAAGGTTATAGATACTGAGAGTGGTAAGAAATTAGGT
CCCAATGAAGAGGGTGAGCTGTGCATTAAGTCGCCTCTCCGCATGAAGGGATATTTGGGT
GATAAAGCATCCGGTGATGCCATGATTGATGAGGAAGGTTATGTTAAGACGGGAGATATT
GGGTACTATGACAAGGAAGGATACTTCTACATTGTTGATAGACTCAAAGAACTCATCAAA
TATAAAGGTTTCCAGATTCCATACTTTTTCCCTCAAGGTCTCTTCATCTTATTCGTCGTC
GGCTTCTTGTCTCTCATCACCGGTCTCCTGATATGTTTCCTTCATCCATACGACGCGATC
TTCCGATGGGTAAGTGTTTTATAA
Protein sequence:
MTTIVPPLAVFLAKHPLVSKYDLSSLNEMWCGAAPLSKEIQTLVTKRTGIDFIKQGYGLT
EVTMACCVDLVGRSKAGSCGTPAPGMKIKVIDTESGKKLGPNEEGELCIKSPLRMKGYLG
DKASGDAMIDEEGYVKTGDIGYYDKEGYFYIVDRLKELIKYKGFQIPYFFPQGLFILFVV
GFLSLITGLLICFLHPYDAIFRWVSVL