| New model in OGS2.0 | DPOGS208565 |
|---|---|
| Genomic Position | scaffold964:+ 37259-41846 |
| See gene structure | |
| CDS Length | 1584 |
| Paired RNAseq reads | 494 |
| Single RNAseq reads | 1253 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010632 (3e-87) |
| Best Drosophila hit | ND |
| Best Human hit | E3 ubiquitin-protein ligase RNF8 isoform 1 (2e-20) |
| Best NR hit (blastp) | PREDICTED: ring finger protein 8-like [Saccoglossus kowalevskii] (8e-35) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (4e-33) |
| GeneOntology terms | GO:0016567 protein ubiquitination GO:0005515 protein binding GO:0008270 zinc ion binding GO:0016881 acid-amino acid ligase activity GO:0005634 nucleus GO:0051301 cell division GO:0006974 response to DNA damage stimulus GO:0016568 chromatin modification GO:0016874 ligase activity GO:0005694 chromosome GO:0046872 metal ion binding GO:0006281 DNA repair |
| InterPro families | IPR001841 Zinc finger, RING-type IPR001878 Zinc finger, CCHC-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR018957 Zinc finger, C3HC4 RING-type IPR017907 Zinc finger, RING-type, conserved site |
| Orthology group | MCL18524 |
Nucleotide sequence:
ATGAAACGCATTGAAGACAAGATAGAGAATACAAAACAAATGAAAACCACAAATCTGCTC
TTAAAAGAACAACTTGAAACTGAAATGAAAAGAAAAATTAATATATTAGAAAGTGAATAT
TCAAGTCAAATTAATAACTTGAAAGGTGAGAAAGATGAAGTCCAAAAACAAAAGTCACAA
CTCATAGAAGAGAGAGAAACACAATTAACTAATCTAAAAAATGCCATGAATGCAAAACTG
GAAGATTTAAAGGAACAAATAAAAAAACATAATGAAAGTGAAATGAAACTCGTCAAGGAA
AATAAAATACTTAAAGAAAAGCTTAAGAAAGAGAGAGAGGAGTTCCTTTTGGAATTAAAC
CGGGAGTCTTCTTCGAAACAGGAGATGTTGGAAAAATTAACAGTGAAAATGAGAGAACAA
GAGGAGTTACGGACAAAAGAAAAAAAGCAGTTCCAAGAACTACTTCAGAAGGAAACGGAA
TCATTAAAACTTGCAAAGGAAAAGGAGTTGAGTGAATTGACGGAAGAGAAGAGGAAAAAG
GAGTTGGAACTAATAACGGAACTAAACAATATAAAAGGTTCTTTGGAGAAGCAGGTGGAG
TTGACAGAGATACAAAAGAGGGAGGCGTTACAAAAACTAAACGACCAAATGGAAGAGATG
AAAAAAATTAAAAATGAGGATCAAATTAAAATGGAACAGCTGAAAAATGAGAGAGAGGAA
ATTCAAAAGCAATTAAAAGAGGCTCAACAAAATGCGGTGGAATCTATAGAAAAATTGAAG
ACTAGAGTGACAGAAAGGGAGATAGAGCTGGCAGCCTTAGCAGCAGAAAGGATCCAGAAA
CAAGCGGAACAATCTACTGAAGTTATAAACTCATTGCAGGAACAATTAGAGAGAGTCCGA
AATCAACTTCACAATGTAGAAAATGAGAACAAGAAGCTTCTAGAACATAACACATCACCA
GAAAATAAGGGGGGCTGTTCTAAAGACACAATAACAGAATTTGGTGAAATAATGGAAAGT
GAATTACAGTGTAGCATATGTGCTGAACTCTTTGTTCAGGCTACAACACTTAATTGTTCG
CATACATTTTGCAAATATTGCATAACCATGTGGAAAAAGAAAAAAAAGGAATGTCCAATA
TGCCGTGCACCGATAACATCGGAGTGTAAAAGTTTAGTTCTAGACTCATTTATAGAGAAG
ATGTTATTGAGTTTATCAGAAGAAATGAAACAGAAAAGGAGCAATTTACTCAAAAGTCGG
GATGAGCTTGAATGTGAACTGGCGCGTCAAGATCAATTGAAAATATACCGAAGAAATTCG
GATGAGTACGAAGAGGAAAGCGACTCCTTCGAGGAGGAGGCGGAGGACGACGACTTCTTC
GACTACGGCTCACTCAGCGACCATACCTATTCCAACAGTGGATCTGACGGGCACGACTTC
GATGTTGATTCAACAGGTGAATCTCCTTTAAGCAGTACCAGTTACGTGCCAGGAATACCA
GGATCCTTCTACGGGGGATACGGGAGATGTTTTCGTTGTGGCGCCTTCGGACATTGGGCA
CCGGGTTGTCCGAACAGATTATAA
Protein sequence:
MKRIEDKIENTKQMKTTNLLLKEQLETEMKRKINILESEYSSQINNLKGEKDEVQKQKSQ
LIEERETQLTNLKNAMNAKLEDLKEQIKKHNESEMKLVKENKILKEKLKKEREEFLLELN
RESSSKQEMLEKLTVKMREQEELRTKEKKQFQELLQKETESLKLAKEKELSELTEEKRKK
ELELITELNNIKGSLEKQVELTEIQKREALQKLNDQMEEMKKIKNEDQIKMEQLKNEREE
IQKQLKEAQQNAVESIEKLKTRVTEREIELAALAAERIQKQAEQSTEVINSLQEQLERVR
NQLHNVENENKKLLEHNTSPENKGGCSKDTITEFGEIMESELQCSICAELFVQATTLNCS
HTFCKYCITMWKKKKKECPICRAPITSECKSLVLDSFIEKMLLSLSEEMKQKRSNLLKSR
DELECELARQDQLKIYRRNSDEYEEESDSFEEEAEDDDFFDYGSLSDHTYSNSGSDGHDF
DVDSTGESPLSSTSYVPGIPGSFYGGYGRCFRCGAFGHWAPGCPNRL