| New model in OGS2.0 | DPOGS209415 |
|---|---|
| Genomic Position | scaffold5845:+ 2104-6328 |
| See gene structure | |
| CDS Length | 3246 |
| Paired RNAseq reads | 3024 |
| Single RNAseq reads | 9422 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012602 (4e-07) |
| Best Drosophila hit | cuticular protein 65Eb (1e-19) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein RR-1 motif 12 [Bombyx mori] (7e-37) |
| Best NR hit (blastx) | cuticular protein RR-1 motif 12 [Bombyx mori] (2e-46) |
| GeneOntology terms | GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | MCL25348 |
Nucleotide sequence:
ATGCCAAAGGTTACTGACATTCTAGTTCTATCAATAATAGCTTATGGCTATGCGGATAAA
TTAGATAAGGGATACCTGCCTCCTGTAAATGCAGCATCATCAGGTGGCAGCCCAGCAGAA
TTAATTGCTCCAGCTGATCAATCTGAGGTTTTCGGGCAAGGGTTGCCCGTTCCAGAAAGT
CAACCAGGCTCTTATATCCAAGATATTGGACAGGAAGTTCTTCAAGCTTACAACCAGGAA
CGCCCTCAAGCAGCAGCTGATAGAAATGCGGAGATACTAAAGTTTAATAACGAAAATAAC
GGTGAATCCTATGCATATAATTATGAAACATCTAACGGGATTTCTGTGGAGGAATCAGGT
GTTGCATCTAATGGAGTTAATGCTCAAGGTGGCTATGCCTACACTGGGGATGACGGTAAA
TCCTATTCAGTCACTTATACGGCAGATATAAATGGCTATCAACCTCAGGGTGAACATTTA
CCTACACCTCACCCTATCCCAGAAGAAATATTAAAGTCCATAGAAGAAAATGCTAGGGCT
GCTGCTGCCGGTACACAAGAAGGAGCTTACAATCCTGAGGAGTATGATTCCAACGTTTAT
TATCAAACAAAGCCAGATCAAGAATCTGATGGTTCTTTAGATGTAATCGAAAGAAACAAA
AATCAAGAAATAAGCTCCATATATAACAATCCCCTCGATTCTGTGGGTCAACAATATCAA
AAAGCATCTAGTTTAGATGTAAATCCATCAGACCAAAAACGGAATAAGGAAAGTGGACAA
GATATTAACCAGATGTACACTCCAAATCCTTATCAATCCCACCAGACCTCTGGTATTGGT
ATTCAAGGAAACAGTGGTTTTGAATCTAGTAGTCAGTCACCTATTCAAGGAATAGCAGGA
CAATTTTTACAAGGAGACGGTTATCAATATAATCAACCTAAATTTTCATTGCAGCCAGTT
TTTCCAGGACAAGATCAATACAAACCGCAAGTAACTAGCGACAATGAAAATATATCATCA
TCGTTAAGACCAAGTTCATCAGGTCCCGCATTTAATAGAGATCAAAATTTGAAACCTTCA
TTTGGAAGCCTTCCCTCAGCTGAACAAACTCCGCAATATCAATCTGGCCAACAAATTCTT
CCAGAATTTAGGCCATCCTCTCATAGCGGACCAAATGCATCTCAAAGTATGAGGGGATCT
GTCCCAAACCAAGACCAACAAATCCAAATCAAGGAATCCTCTGGCGATTTGAAGGAGAGC
AAAGGAAATGGTTATCATTACAATCAACCAAAGCCCGTGTTCCAACCCGCTAATTCCGAA
CAAAGCTCGTTAAACCAATATCGTCCAGAATTATCTGGCCAAAGCGAAAAGATATCATCT
TCAAGACCAGGCTTATCAGGATCCATATACAATGGAGATCAGAATTTGAAACCTTCATTT
GGAAGCCTTCCCCCAGCTGATCAATCTTCGCAGTATCAATCTGGCCAACAAATTCTTCCA
GAATTTAGGCCCTCCTCTCATAGCGGACCAAATGCATCTCAAAATATGAGGGGATCTCTC
CCAAACCAAGACCAACAAATCCAAATCAAGGAATCATCTGGCGATTTGAACGAAAGCAAA
GGAAATGGTTATCATTACAATCAACCAAAGCCCGCTTTCCAACCCGCTAATTCCGAACAA
AGCTCGTTAAACCAATATCGTCCAGAATTATCTGGCCAAAGTGAAAAGATATCATCTTCT
TCAAGGCCAGGCTTATCAGGATCCATATATAATGGAGATCAGAATTTGAAACCTTCATTT
GGAAGCCTTCCCCCAGCTGATCAATCTTCGCAGTATCAATCTGGCCAACAAATTCTTCCA
GAATTTAGGCCCTCATCACATAGCGGACCAAATGCATCTCAAAATATGAAGGGATCTCTC
CCAAATCAAGACCAACAAATCCAAATTAAAGAATCCTCTGGCGATTTGAACGAAAACAAA
GGAAATGGTTATCATTACAATCAACCAAAGCCCGCTTTCCAACCCGCTAATTCCGAACAA
AGCTCGTTAAACCAATATCGTCCAGAATTATCTGGCCAAAGTGAAAAGATATCATCTTCT
TCAAGGCCAGGCTTATCAGGATCCATATATAATGGAGATCAGAATTTGAAACCTTCATTT
GGAAGCCTTCCCCCAGCTGATCAATCTTCGCAGTATCAATCTGGCCAACAAATTCTTCCA
GAATTTAGGCCCTCCTCACATAGCGGACCAAATGCATCTCAAAATATGAAGGGATCTCTC
CCAAATCAAGACCAACAAATCCAAATTAAAGAATCCTCTGGCGATTTGAACGAAAACAAA
GGAAATGGTTATCATTACAATCAACCAAAGCCCGCTTTCCAACCCGCTAATTCCGAACAA
AGCTCGTTAAACCAATATCGTCCAGAATTATCTGGCCAAAGTGAAAAGATATCATCTTCT
TCAAGGCCAGGCTTATCAGGATCCATATATAATGGAGATCAGAATTTGAAACCTTCATTT
GGAAGCCTTCCCCCAGCTGATCAATCTTCGCAGTATCAATCTGGCCAACAAATTCTTCCA
GAATTTAGGCCCTCCTCACATAGCGGACCAAATGCATCTCAAAATATGAAGGGATCTCTC
CCAAATCAAGACCAACAAATCCAAATTAAAGAATCCTCTGGCGATTTGAACGAAAACAAA
GGAAATGGTTATCATTACAATCAACCAAAGCCCGCTTTCCAACCCGCTAATTCCGAACAA
AGCTCGTTAAACCAATATCGTCCAGAATTATCTGGCCAAAGTGAAAAGATATCATCTTCT
TCAAGGCCAGGCTTATCAGGATCCATATATAATGGAGATCAGAATTTGAAACCTTCATTT
GGAAGCCTTCCCCCAGCTGATCAATCTTCGCAGTATCAATCTGGCCAACAAATTCTTCCA
GAATTTAGGCCCTCCTCACATAGCGGACCAAATGCATCTCAAAATATGAAGGGATCTCTC
CCAAATCAAGACCAACAAATCCAAATTAAAGAATCCTCTGGCGATTTGAACGAAAACAAA
GGAAATGGTTATCATTACAATCAACCAAAGCCCGCTTTCCAACCCGCTAATTCCGAACAA
AGCTCGTTAAACCAATATCGTCCAGAATTATCTGGCCAAAGTGAAAAGATATCATCTTCT
TCAAGGCCAGGCTTATCAGGATCCATATATAATGGAGATCAGAATTTGAAACACAAAATA
AAATGA
Protein sequence:
MPKVTDILVLSIIAYGYADKLDKGYLPPVNAASSGGSPAELIAPADQSEVFGQGLPVPES
QPGSYIQDIGQEVLQAYNQERPQAAADRNAEILKFNNENNGESYAYNYETSNGISVEESG
VASNGVNAQGGYAYTGDDGKSYSVTYTADINGYQPQGEHLPTPHPIPEEILKSIEENARA
AAAGTQEGAYNPEEYDSNVYYQTKPDQESDGSLDVIERNKNQEISSIYNNPLDSVGQQYQ
KASSLDVNPSDQKRNKESGQDINQMYTPNPYQSHQTSGIGIQGNSGFESSSQSPIQGIAG
QFLQGDGYQYNQPKFSLQPVFPGQDQYKPQVTSDNENISSSLRPSSSGPAFNRDQNLKPS
FGSLPSAEQTPQYQSGQQILPEFRPSSHSGPNASQSMRGSVPNQDQQIQIKESSGDLKES
KGNGYHYNQPKPVFQPANSEQSSLNQYRPELSGQSEKISSSRPGLSGSIYNGDQNLKPSF
GSLPPADQSSQYQSGQQILPEFRPSSHSGPNASQNMRGSLPNQDQQIQIKESSGDLNESK
GNGYHYNQPKPAFQPANSEQSSLNQYRPELSGQSEKISSSSRPGLSGSIYNGDQNLKPSF
GSLPPADQSSQYQSGQQILPEFRPSSHSGPNASQNMKGSLPNQDQQIQIKESSGDLNENK
GNGYHYNQPKPAFQPANSEQSSLNQYRPELSGQSEKISSSSRPGLSGSIYNGDQNLKPSF
GSLPPADQSSQYQSGQQILPEFRPSSHSGPNASQNMKGSLPNQDQQIQIKESSGDLNENK
GNGYHYNQPKPAFQPANSEQSSLNQYRPELSGQSEKISSSSRPGLSGSIYNGDQNLKPSF
GSLPPADQSSQYQSGQQILPEFRPSSHSGPNASQNMKGSLPNQDQQIQIKESSGDLNENK
GNGYHYNQPKPAFQPANSEQSSLNQYRPELSGQSEKISSSSRPGLSGSIYNGDQNLKPSF
GSLPPADQSSQYQSGQQILPEFRPSSHSGPNASQNMKGSLPNQDQQIQIKESSGDLNENK
GNGYHYNQPKPAFQPANSEQSSLNQYRPELSGQSEKISSSSRPGLSGSIYNGDQNLKHKI
K