| New model in OGS2.0 | DPOGS207341 |
|---|---|
| Genomic Position | scaffold474:+ 36477-51281 |
| See gene structure | |
| CDS Length | 1593 |
| Paired RNAseq reads | 4140 |
| Single RNAseq reads | 10511 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010271 (0.0) |
| Best Drosophila hit | katanin 60 (1e-165) |
| Best Human hit | katanin p60 ATPase-containing subunit A-like 1 (2e-155) |
| Best NR hit (blastp) | Katanin p60 ATPase-containing subunit, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | Katanin p60 ATPase-containing subunit, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0008352 katanin complex GO:0051013 microtubule severing GO:0007017 microtubule-based process GO:0008017 microtubule binding GO:0005524 ATP binding GO:0017111 nucleoside-triphosphatase activity GO:0005515 protein binding |
| InterPro families | IPR003593 ATPase, AAA+ type, core IPR003959 ATPase, AAA-type, core IPR015415 Vps4 oligomerisation, C-terminal IPR003960 ATPase, AAA-type, conserved site |
| Orthology group | MCL11605 |
Nucleotide sequence:
ATGGCAGTTTCTGTTGGCGAAATTTGCGAGAATACTAAGTTGGCTAGAGAAATGGCATTA
ATGGGGAACTATGAATCTGCTCTTGTATACTACGAAGGAACCGTTCAGATGATCCACAGA
CTTCTCATAACTATAGCTGACCCCACACGAAAGTCGAAGTGGCAGTTGGTCCAGAAGCAG
ATGGCCAGGGAATACGAACAACTGAAAGCGACGGTAGCAACCTTACAGATGTTCCAGCAT
GAGGGTGAAAAAGCGATCACGCCATTAACCAGCACGTTAGAAGACCTGCCCACCCGCGAC
CAGATGTGGGCACCGGCGCCTCACGAGATAGACCCCGACATCTGGCCGCCCCCGCCGGAC
AGAGATCCCGCCTGGCCATCGCCCACCAGTGTTGAACACAAAGGCCCACCGACTATGAAA
TCAGCGAGGAACAATCCAAGGAACGCCAGGACGAATGATAAGAAGACGCCGGCTGGACGG
GTGGCGACCACATCACACAGGAAGACCTCGGACGTCAGGAACCCCAAATTAAACACCAAT
AAAACACACAGCGCCAAGACGAAAGAGCAATCGAACAAGGATCACAGTACAAAGGACAAG
CAGGATAGGGACAATAACAACGGAGACACGGACGAAGAGAAACACAAGGAGGACGAGAGA
AGGTTCGAGCCGCCGTCAGCTGCCGACGGGGATCTGGTGGATATGCTGGAACGTGATATA
GTACAAAAGAATCCCAACATCCGATGGGATGACATTGCTGACTTGGCCGAGGCCAAGAGG
CTGTTGGAGGAGGCTGTGGTCCTACCAATGTGGATGCCGGACTTCTTTAAGGGTATCCGT
CGTCCGTGGAAGGGTGTTCTGATGGTGGGTCCGCCTGGCACGGGGAAGACGATGCTCGCT
AAGGCCGTGGCCACGGAGTGTGGAACGACATTCTTCAACGTGTCCAGCTCGACGCTCACA
TCCAAATACCGGGGGGAATCCGAGAAGTTGGTGCGACTACTGTTCGAAATGGCTCGTTTC
TACGCTCCCAGTACTATCTTCATAGACGAGATCGATTCCCTGTGTTCCCGCCGCGGGTCA
GACAGTGAACACGAGGCCTCCAGGCGAGTGAAGTCAGAACTGTTGGTGCAGATGGATGGC
CTCGGCTCAGCCACGGACGAGCCGGCTAAGGTGGTGATGGTGCTAGCTGCTACAAACTTC
CCTTGGGACATTGACGAAGCGTTACGGCGAAGGCTTGAAAAACGAATCTACATACCGCTG
CCAACGCAAGAGGGTCGAGAGGCGTTACTGCAGATTAACCTTAGAGAGGTCAAAGTTGAC
CCCGAGGTAGACCTGCGACTTATAGCAAAAAAACTTGACGGATACTCTGGAGCTGATATA
ACTAATGTCTGCAGAGATGCCTCAATGATGTCCATGCGACGGAAAATAGCTGGCTTGAAG
CCGGAGCAGATAAAACAACTTGCCAAGGAAGAACTAGACCTGCCCGTTACGAGGCAGGAT
TTCTTAGAAGCACTGTCGAAATGCAATAAATCAGTGTCCAAAGGTGACATACAGAAATAC
CTCACCTGGATGGCAGAGTTTGGATCCTCCTGA
Protein sequence:
MAVSVGEICENTKLAREMALMGNYESALVYYEGTVQMIHRLLITIADPTRKSKWQLVQKQ
MAREYEQLKATVATLQMFQHEGEKAITPLTSTLEDLPTRDQMWAPAPHEIDPDIWPPPPD
RDPAWPSPTSVEHKGPPTMKSARNNPRNARTNDKKTPAGRVATTSHRKTSDVRNPKLNTN
KTHSAKTKEQSNKDHSTKDKQDRDNNNGDTDEEKHKEDERRFEPPSAADGDLVDMLERDI
VQKNPNIRWDDIADLAEAKRLLEEAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLA
KAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDSLCSRRGS
DSEHEASRRVKSELLVQMDGLGSATDEPAKVVMVLAATNFPWDIDEALRRRLEKRIYIPL
PTQEGREALLQINLREVKVDPEVDLRLIAKKLDGYSGADITNVCRDASMMSMRRKIAGLK
PEQIKQLAKEELDLPVTRQDFLEALSKCNKSVSKGDIQKYLTWMAEFGSS