DPGLEAN12600 in OGS1.0

New model in OGS2.0DPOGS210429 
Genomic Positionscaffold10190:- 691-4118
See gene structure
CDS Length669
Paired RNAseq reads  199
Single RNAseq reads  659
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012644 (4e-51)
Best Drosophila hit  Rab23 (5e-70)
Best Human hitras-related protein Rab-23 (7e-60)
Best NR hit (blastp)  PREDICTED: similar to rab23 [Nasonia vitripennis] (6e-86)
Best NR hit (blastx)  PREDICTED: similar to GA15247-PA [Tribolium castaneum] (1e-86)
GeneOntology terms


  
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
InterPro families






  
IPR020851 Small GTPase
IPR003577 Ras small GTPase, Ras type
IPR003579 Ras small GTPase, Rab type
IPR003578 Small GTPase, Rho type
IPR002041 Ran GTPase
IPR013753 Ras
IPR005225 Small GTP-binding protein
IPR001806 Ras GTPase
Orthology groupMCL14044

Nucleotide sequence:

ATGCGGGAAGAAGAGCTGGAGGTAGCTCTGAAGGTTGTGATCGTCGGCGACGGTGGTGTT
GGCAAATCGAGTATGATCCAACGTTACTGTCGAGGCACCTTCACCAGGGATTACAAGAAA
ACCATCGGGGTAGACTTTCTTGAGCGGCAGATCGATATCGATGGAGAGGAGGTGAGACTG
ATGCTGTGGGACACGGCTGGTCAGGAGGAGTTCGACGCTATAACTAAAGCGTATTACAGA
GGAGCCCACGCCTGTGTGCTGGCTTTCTCGACAACAGACAGAGACTCCTTTTTAGCTTTG
CATTCATGGAAACTTAAGGTCGAGAATGAATGCGGAGAAATTCCTACAATTATAGTCCAG
AATAAAATTGACCTGATGGATCAATGTGTGGTCGGACCTGACGAGGCGGAGTTAGTGGCC
CGGGCGCTGGGTTGCCGCCTAATGCGTGCGTCTGTCAAAGAAGACGTTAACGTTGGCGCA
GTATTTCGAGCGCTGGCCTCGCGCTGCCTCGCCGACCTGAGAGCTGACAGTGAACCGCCT
CCAACAGCAACACCACTTATAGGTACATTTACAAACCATAACAGCAACGGAACTATCTTA
CTGAGACCTACGAAGAACCGTTCCGGCAAGAAGAAGAACGTACTCAAGAGCGCTTGCCGT
ATATTGTAA

Protein sequence:

MREEELEVALKVVIVGDGGVGKSSMIQRYCRGTFTRDYKKTIGVDFLERQIDIDGEEVRL
MLWDTAGQEEFDAITKAYYRGAHACVLAFSTTDRDSFLALHSWKLKVENECGEIPTIIVQ
NKIDLMDQCVVGPDEAELVARALGCRLMRASVKEDVNVGAVFRALASRCLADLRADSEPP
PTATPLIGTFTNHNSNGTILLRPTKNRSGKKKNVLKSACRIL