New model in OGS2.0 | DPOGS210429  |
---|---|
Genomic Position | scaffold10190:- 691-4118 |
See gene structure | |
CDS Length | 669 |
Paired RNAseq reads   | 199 |
Single RNAseq reads   | 659 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012644 (4e-51) |
Best Drosophila hit   | Rab23 (5e-70) |
Best Human hit | ras-related protein Rab-23 (7e-60) |
Best NR hit (blastp)   | PREDICTED: similar to rab23 [Nasonia vitripennis] (6e-86) |
Best NR hit (blastx)   | PREDICTED: similar to GA15247-PA [Tribolium castaneum] (1e-86) |
GeneOntology terms    | GO:0003924 GTPase activity GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction GO:0015031 protein transport |
InterPro families    | IPR020851 Small GTPase IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR013753 Ras IPR005225 Small GTP-binding protein IPR001806 Ras GTPase |
Orthology group | MCL14044 |
Nucleotide sequence:
ATGCGGGAAGAAGAGCTGGAGGTAGCTCTGAAGGTTGTGATCGTCGGCGACGGTGGTGTT
GGCAAATCGAGTATGATCCAACGTTACTGTCGAGGCACCTTCACCAGGGATTACAAGAAA
ACCATCGGGGTAGACTTTCTTGAGCGGCAGATCGATATCGATGGAGAGGAGGTGAGACTG
ATGCTGTGGGACACGGCTGGTCAGGAGGAGTTCGACGCTATAACTAAAGCGTATTACAGA
GGAGCCCACGCCTGTGTGCTGGCTTTCTCGACAACAGACAGAGACTCCTTTTTAGCTTTG
CATTCATGGAAACTTAAGGTCGAGAATGAATGCGGAGAAATTCCTACAATTATAGTCCAG
AATAAAATTGACCTGATGGATCAATGTGTGGTCGGACCTGACGAGGCGGAGTTAGTGGCC
CGGGCGCTGGGTTGCCGCCTAATGCGTGCGTCTGTCAAAGAAGACGTTAACGTTGGCGCA
GTATTTCGAGCGCTGGCCTCGCGCTGCCTCGCCGACCTGAGAGCTGACAGTGAACCGCCT
CCAACAGCAACACCACTTATAGGTACATTTACAAACCATAACAGCAACGGAACTATCTTA
CTGAGACCTACGAAGAACCGTTCCGGCAAGAAGAAGAACGTACTCAAGAGCGCTTGCCGT
ATATTGTAA
Protein sequence:
MREEELEVALKVVIVGDGGVGKSSMIQRYCRGTFTRDYKKTIGVDFLERQIDIDGEEVRL
MLWDTAGQEEFDAITKAYYRGAHACVLAFSTTDRDSFLALHSWKLKVENECGEIPTIIVQ
NKIDLMDQCVVGPDEAELVARALGCRLMRASVKEDVNVGAVFRALASRCLADLRADSEPP
PTATPLIGTFTNHNSNGTILLRPTKNRSGKKKNVLKSACRIL