New model in OGS2.0 | DPOGS211143  |
---|---|
Genomic Position | scaffold230:+ 53858-59583 |
See gene structure | |
CDS Length | 2790 |
Paired RNAseq reads   | 527 |
Single RNAseq reads   | 1480 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003015 (0.0) |
Best Drosophila hit   | CG4705, isoform B (2e-74) |
Best Human hit | WD repeat-containing protein 59 (7e-111) |
Best NR hit (blastp)   | PREDICTED: similar to WD repeat-containing protein 59 [Tribolium castaneum] (4e-166) |
Best NR hit (blastx)   | PREDICTED: similar to WD repeat-containing protein 59 [Tribolium castaneum] (8e-153) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR019775 WD40 repeat, conserved site |
Orthology group | MCL14900 |
Nucleotide sequence:
ATGTCAGTCCATTGGAGTTCGGAAATTATGAAATGGGAATATAGAGAACTTCAAGCAACA
GCTATGTCTGTTGATTATTCGGGAAACAATGTGCTACTGGCGGGTCGTCGGTGGTTAGCT
ATAAAACATATCAGTGTTGATGACGATGCCGGGGATATTGTTAAAAAGTATCCACGCCCC
AGTAAATACGACGCCGCTGGCGCAGAATGGTGCCAAACATACCCCGGGCAGAAACTGTGT
GCAATTGCGAGTAATCAACGAGTTGATGTATATGAATGGCGAGCTGGAAATGATCTAACA
TGTATATGTTCGCTTCGAGGGCATACAAGGGTGGTCAGTGATACACATTTCCATAGACAG
GATCACAACATTATAGCAACTTGTTCTATAGACACATTTACATACCTTTGGGACTTGCGG
GATTCTAGGAAGCCAATAGTTTCACTGAGTGCTGTAGCCGGTGCGTCCCAGGTGCAGTGG
AACAAAGTTTCATCACACTTGGTAGCCACTGCGCACGACGGTGACATAAAAATATGGGAC
TATCGTAAAAATTCCTCACCCCTGCACTACATATCAGCTCATCTGTGTAAGATTCATGGT
GTCGACTGGAGCCCACACCATGAATACCAGCTGGTAACCTCTAGTCACGACGGTAGCATT
AAGTACTTCGATATAAACAATGCTAGGAAGGCTGAAAACGTTATAATGACTAATTTCCCT
GTATGGAGAGCAATTTACACGCCATTTGGTAATGGATTGTTGACTATTGGAGTGGGTTGG
GGAGGTTTGCCTAGAGTGGAACAGGCTGGTGTTATCGGTATCTGGATTGGAGGAACGTTG
ACGCATAGGTTAGTGGGACACACGGATACTGTCCAAACTATGGTTTGGAGGCCAAACACA
CTTCCATCAAACTACCAACTGGTGACCTGGGGTAGAGACCAAACGCTTAGGTTGTGGACA
ATGCATCCATCACTCCTCAAAATGTGTTCACATTATTTGCCTGATGATTTAGAAAATGAC
GATATTAATAGCGATGTACATAAAACAACTACCTCAATAGACGAAGAATTCGAGTCTATT
CGTGAGATGGCCAATATAGAGGTCACTGACATGAATATAGAGACGAGGATTTGTCAGATA
CATTCAGAGAGAAACGGTTACACTGCCAATTTACAAGTGACCTTCCCTAGAAACGTTACA
GAGCAAACCATACCTAAATTCTCATGGTTATCAGGTACTAATGTAGACAGCGGTACCACT
ATTAAAATTTTACAAGCTATCAACAGAACCGCCTATCGTAAGAAGAAGGAAGGGCATAGA
TGCTTGTTACACTGCCTCAAGACTCTAGCGACGTCTATAGACGAGATACCCGTGAAGTCA
AACGAGGATTCGGATTCCATGAAGTCGAGTCAGAGGAGCCACTCCGAGAGTGAGAACGCT
GGGGACTCTTGCATACCGTTCCCGAGAACTTGCGGTGCTAAATGGTGCGGTGTCAGTACG
CTGGTTGTGTTCAACCGACCTCCGAACACTAGACGACTGTCCTTGAAACCTGAGACGGGC
ACCCCAAGGTCTATGTCTTCTCTGTCATTGACTCCGGGACTGTTCACATCCAGCTATACT
TCCGTTTCCCCCCACGCGACCACAACGCCCTCACCAACGAACGCTTCAGGATTCCCTCAG
TTGCATCACAGGCACGCGTCCAATTCAATCACAACCTTCTACTTCCAAGATCGCTGGAAG
GCTCAGAGTCGTCGTGCGGGCAGCATGCGTAGTCGTGGCAGCATCTCAGGCTGCCTGGCA
CCACGCGTGCTGCTCTACGCTGCCGGTGATCTGTTCCCTCTCAACAGAGCCTTGGCCGAG
AGATACGTCATCAACGCTGATAACCCTGTCGACATGTGTGAAAAGAATGCAAAAGTTGCG
ACGGAGGAGGGCGAGTTAGAGCTGGCCCATGCCTGGGGTCTGGCGGGGCTGGCTGCTCGG
TCGCTGGACGCGAGAACGGTGGACCACATCGTCTCCAGTGAAGAGAGTATGGGCTGGACC
GGTCATCCGCTGTGCTGCAACCTTGTACAGGCGCTAATAACACATTATGCAAAATCATCG
GACCTACAAACGGCGGCCATGTTGACCTGCGCGTTCTCCGTCTTCAACGACACGAACATC
TCGAGTTCCGTGTCTACAATCAGCAGTTCCAGCTGTGGCAACAGTACTTCACCTTACAGT
ACCATAAACCAATACAGCGAAATAAGCGCTGACGGCTGGACGCTGCCAATCATTCTGCGA
AGCAATTCGTGTTCCGAAGCAGAGAACTTGAACACGGAGTACAGCGGCACTAAGTCCGAG
CCATCCACAGCCTGTGTCATAGACAAGGCGACTGCTCACTTATACCACTGCTTCAAGAGG
GCGTATGCCGATGTGTTGCATAGATGGCAGCTCTTGTACAAACGGACTGAGGTGATGAAG
CTAGTGCGCACGTACCCAGAGACAGTGATGGGCGGTATGGGCACTATGGGCGGTGTGGGC
GTGGTTGGCGAGGCCGCTTGGGAATGCGCGTGGTGTGGACGCACAGTACGAGGCCCTGCG
TGTAGTTCGTGCCGGCGACTCAGTCTGCGGTGTGGCGTGTGCTCACGTGGTGTGAAGGGC
CTCGTGCTCGCCTGTGGACTGTGCTCTCACGCCGCTCACGCACATCACATGCTAGCATGG
TTCTCACAACACGACACGTGTCCTACGGGATGCGGCTGCAAATGCGTCATAGAAGGTAAC
TCAATATGGAAAGGTGTCAAATACGTCTGA
Protein sequence:
MSVHWSSEIMKWEYRELQATAMSVDYSGNNVLLAGRRWLAIKHISVDDDAGDIVKKYPRP
SKYDAAGAEWCQTYPGQKLCAIASNQRVDVYEWRAGNDLTCICSLRGHTRVVSDTHFHRQ
DHNIIATCSIDTFTYLWDLRDSRKPIVSLSAVAGASQVQWNKVSSHLVATAHDGDIKIWD
YRKNSSPLHYISAHLCKIHGVDWSPHHEYQLVTSSHDGSIKYFDINNARKAENVIMTNFP
VWRAIYTPFGNGLLTIGVGWGGLPRVEQAGVIGIWIGGTLTHRLVGHTDTVQTMVWRPNT
LPSNYQLVTWGRDQTLRLWTMHPSLLKMCSHYLPDDLENDDINSDVHKTTTSIDEEFESI
REMANIEVTDMNIETRICQIHSERNGYTANLQVTFPRNVTEQTIPKFSWLSGTNVDSGTT
IKILQAINRTAYRKKKEGHRCLLHCLKTLATSIDEIPVKSNEDSDSMKSSQRSHSESENA
GDSCIPFPRTCGAKWCGVSTLVVFNRPPNTRRLSLKPETGTPRSMSSLSLTPGLFTSSYT
SVSPHATTTPSPTNASGFPQLHHRHASNSITTFYFQDRWKAQSRRAGSMRSRGSISGCLA
PRVLLYAAGDLFPLNRALAERYVINADNPVDMCEKNAKVATEEGELELAHAWGLAGLAAR
SLDARTVDHIVSSEESMGWTGHPLCCNLVQALITHYAKSSDLQTAAMLTCAFSVFNDTNI
SSSVSTISSSSCGNSTSPYSTINQYSEISADGWTLPIILRSNSCSEAENLNTEYSGTKSE
PSTACVIDKATAHLYHCFKRAYADVLHRWQLLYKRTEVMKLVRTYPETVMGGMGTMGGVG
VVGEAAWECAWCGRTVRGPACSSCRRLSLRCGVCSRGVKGLVLACGLCSHAAHAHHMLAW
FSQHDTCPTGCGCKCVIEGNSIWKGVKYV