New model in OGS2.0 | DPOGS210123  |
---|---|
Genomic Position | scaffold470:+ 55660-57293 |
See gene structure | |
CDS Length | 696 |
Paired RNAseq reads   | 1408 |
Single RNAseq reads   | 3708 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000231 (7e-71) |
Best Drosophila hit   | VhaPPA1-1 (2e-56) |
Best Human hit | V-type proton ATPase 21 kDa proteolipid subunit isoform 1 (6e-42) |
Best NR hit (blastp)   | vacuolar ATP synthase 21 kDa proteolipid subunit [Bombyx mori] (3e-80) |
Best NR hit (blastx)   | vacuolar ATP synthase 21 kDa proteolipid subunit [Bombyx mori] (2e-74) |
GeneOntology terms    | GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain GO:0015986 ATP synthesis coupled proton transport GO:0007052 mitotic spindle organization |
InterPro families    | IPR002379 ATPase, F0/V0 complex, subunit C IPR011555 ATPase, V0 complex, proteolipid subunit C, eukaryotic IPR000245 ATPase, V0 complex, proteolipid subunit C |
Orthology group | MCL13950 |
Nucleotide sequence:
ATGAGATACTTTATGACCTACCTGTTTTTGCTGATCGTGGGGCTGGCGGTACCTATAGTT
TCGATGTACTATCTTCTGTCTGGAAAGGGTGAGCAAATAAGTGTCGGATGGTTCTTGGAG
AAGACATCCCCATATATGTGGGCATGCTTAGGAATTGCCATGGCCGTGTCTTTCTCTGTG
GTCGGTGCTGCTATGGGCATTCACACGACGGGAGTGAGCATAGTCGGAGGAGGTGTCAAG
GCCCCTAGGATTAAAACTAAGAACTTGATCTCCGTCATTTTCTGTGAAGCCGTAGCTATT
TACGGTTTGATCACAGCAATCGTCCTTTCTGGTATCTTGGAGCAGTACAAGGAACCAGTC
ATCGACAAAAATATCGAAGAAGCGAATTGGATGGCTGGTTACGTGATGTTCGGAGCTGGT
TTAGCTGTGGGCTTGGTAAACTTGTTCTGTGGTATCGCTGTCGGAATCGTGGGTTCCGGC
GCGGCCTTGGCTGATGCTGCTAATGCTGCCCTTTTTGTCAAGATCCTCATCGTAGAAATC
TTCGGATCAGCCATTGGGTTGTTTGGACTCATTGAGAAAGTACAACTTGAAATTAAGTTT
AACAAGCATTTTCCAGTTGCCCGTGCTAAAATAACCGAGAAGCAACTTTGTTTCAATAAG
TGTTGGAATTATCTTCAGCCACTGTTTGTTGTGTAA
Protein sequence:
MRYFMTYLFLLIVGLAVPIVSMYYLLSGKGEQISVGWFLEKTSPYMWACLGIAMAVSFSV
VGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGILEQYKEPV
IDKNIEEANWMAGYVMFGAGLAVGLVNLFCGIAVGIVGSGAALADAANAALFVKILIVEI
FGSAIGLFGLIEKVQLEIKFNKHFPVARAKITEKQLCFNKCWNYLQPLFVV