New model in OGS2.0 | DPOGS212893  |
---|---|
Genomic Position | scaffold6269:- 3547-5314 |
See gene structure | |
CDS Length | 702 |
Paired RNAseq reads   | 89 |
Single RNAseq reads   | 275 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013129 (5e-49) |
Best Drosophila hit   | CG31414 (3e-41) |
Best Human hit | glucosylceramidase isoform 2 (3e-40) |
Best NR hit (blastp)   | PREDICTED: similar to glucosidase, beta, acid [Ciona intestinalis] (1e-48) |
Best NR hit (blastx)   | PREDICTED: similar to glucosidase, beta, acid [Ciona intestinalis] (3e-48) |
GeneOntology terms    | GO:0004348 glucosylceramidase activity GO:0005975 carbohydrate metabolic process GO:0005764 lysosome GO:0006665 sphingolipid metabolic process GO:0007040 lysosome organization GO:0043169 cation binding |
InterPro families    | IPR017853 Glycoside hydrolase, superfamily IPR001139 Glycoside hydrolase, family 30 IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR013780 Glycosyl hydrolase, family 13, all-beta |
Orthology group | ND |
Nucleotide sequence:
ATGGTTGGAGACGATCAGCGACTCACCATACCTTATTGGTTTAACGAGATGGTTTCGTAT
CGTCCCGAATCTCTAAAATACGTGGACGGTGTCGCTGTACACTACTATACAGACATGTTT
GTCTCCCCGGTTAAGCTTGAAGCAGTTACTAAGACCCATCCAGAAAAATTTATTCTGGCC
ACTGAAGCCTGTGAAGGCGTTAATGCCGGACAGAAAAACTTTGTGCTGTTGGGCTCCTGG
GAAAGAGCGAGGTCATACATATTAGACATACTGGAAGATTTAAATTATAACTTAGTTGGA
TGGATTGATTGGAATCTGTGTCTCGACCCTCGCGGAGGTCCCAACTGGGCGAGTAACTTC
GCTGATGCTGCTATAATTGTTGACAAAACAAACGACGAATTCATAAAACAGCCCATGTTC
TATGCGATGGGACATTTTTCAAAGTTTATTCCTCGTGGTTCCAGAAGAATAAAAGTCAAA
GAACATAAGTCAATATTTGAACTTTCTTTGAGACACGTCGCCTTTATCACGCCGAGAGGT
ACGATCGTGGCCGTCATTTACAACGACGGCCGTTCGCAGACGATATCCATAACTATTAAA
AACAGACAGTTGAAGGTAAAGCTCGAAGGGGATTCAGTGTCGACGATAGAGTTCCAATCT
GATGAAGTCATGACTTTACAAACAAAGGGAATTGACAAATAA
Protein sequence:
MVGDDQRLTIPYWFNEMVSYRPESLKYVDGVAVHYYTDMFVSPVKLEAVTKTHPEKFILA
TEACEGVNAGQKNFVLLGSWERARSYILDILEDLNYNLVGWIDWNLCLDPRGGPNWASNF
ADAAIIVDKTNDEFIKQPMFYAMGHFSKFIPRGSRRIKVKEHKSIFELSLRHVAFITPRG
TIVAVIYNDGRSQTISITIKNRQLKVKLEGDSVSTIEFQSDEVMTLQTKGIDK