DPGLEAN12637 in OGS1.0

New model in OGS2.0DPOGS212893 
Genomic Positionscaffold6269:- 3547-5314
See gene structure
CDS Length702
Paired RNAseq reads  89
Single RNAseq reads  275
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA013129 (5e-49)
Best Drosophila hit  CG31414 (3e-41)
Best Human hitglucosylceramidase isoform 2 (3e-40)
Best NR hit (blastp)  PREDICTED: similar to glucosidase, beta, acid [Ciona intestinalis] (1e-48)
Best NR hit (blastx)  PREDICTED: similar to glucosidase, beta, acid [Ciona intestinalis] (3e-48)
GeneOntology terms




  
GO:0004348 glucosylceramidase activity
GO:0005975 carbohydrate metabolic process
GO:0005764 lysosome
GO:0006665 sphingolipid metabolic process
GO:0007040 lysosome organization
GO:0043169 cation binding
InterPro families


  
IPR017853 Glycoside hydrolase, superfamily
IPR001139 Glycoside hydrolase, family 30
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR013780 Glycosyl hydrolase, family 13, all-beta
Orthology groupND

Nucleotide sequence:

ATGGTTGGAGACGATCAGCGACTCACCATACCTTATTGGTTTAACGAGATGGTTTCGTAT
CGTCCCGAATCTCTAAAATACGTGGACGGTGTCGCTGTACACTACTATACAGACATGTTT
GTCTCCCCGGTTAAGCTTGAAGCAGTTACTAAGACCCATCCAGAAAAATTTATTCTGGCC
ACTGAAGCCTGTGAAGGCGTTAATGCCGGACAGAAAAACTTTGTGCTGTTGGGCTCCTGG
GAAAGAGCGAGGTCATACATATTAGACATACTGGAAGATTTAAATTATAACTTAGTTGGA
TGGATTGATTGGAATCTGTGTCTCGACCCTCGCGGAGGTCCCAACTGGGCGAGTAACTTC
GCTGATGCTGCTATAATTGTTGACAAAACAAACGACGAATTCATAAAACAGCCCATGTTC
TATGCGATGGGACATTTTTCAAAGTTTATTCCTCGTGGTTCCAGAAGAATAAAAGTCAAA
GAACATAAGTCAATATTTGAACTTTCTTTGAGACACGTCGCCTTTATCACGCCGAGAGGT
ACGATCGTGGCCGTCATTTACAACGACGGCCGTTCGCAGACGATATCCATAACTATTAAA
AACAGACAGTTGAAGGTAAAGCTCGAAGGGGATTCAGTGTCGACGATAGAGTTCCAATCT
GATGAAGTCATGACTTTACAAACAAAGGGAATTGACAAATAA

Protein sequence:

MVGDDQRLTIPYWFNEMVSYRPESLKYVDGVAVHYYTDMFVSPVKLEAVTKTHPEKFILA
TEACEGVNAGQKNFVLLGSWERARSYILDILEDLNYNLVGWIDWNLCLDPRGGPNWASNF
ADAAIIVDKTNDEFIKQPMFYAMGHFSKFIPRGSRRIKVKEHKSIFELSLRHVAFITPRG
TIVAVIYNDGRSQTISITIKNRQLKVKLEGDSVSTIEFQSDEVMTLQTKGIDK