New model in OGS2.0 | DPOGS203885  |
---|---|
Genomic Position | scaffold697:+ 27125-40848 |
See gene structure | |
CDS Length | 1233 |
Paired RNAseq reads   | 340 |
Single RNAseq reads   | 751 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003834 (4e-81) |
Best Drosophila hit   | crooked legs, isoform D (3e-26) |
Best Human hit | zinc finger protein 717 (2e-27) |
Best NR hit (blastp)   | hypothetical protein BRAFLDRAFT_208499 [Branchiostoma floridae] (4e-34) |
Best NR hit (blastx)   | hypothetical protein BRAFLDRAFT_57705 [Branchiostoma floridae] (1e-42) |
GeneOntology terms    | GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0008150 biological_process |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | MCL39783 |
Nucleotide sequence:
ATGTCAGTAGATCTGTTACATTCAGATTCATATAATTTTAGTTACTTTCAACAAGACGAC
GTATGCAGACTTTGCTGGAGTAGGAACGCTTTCACACAAATTATAGAAATATCTCCGAAT
ATGTCGTGTGGAAATGAGAATTATTTTCAAAAAATAACAGAATGCTTGGATATAGATCTA
ACAAAATATGATCATCCTAACAAAGCATGCGACAGTTGCTTGGATCAAATTAACAAATTT
CATGACTTTAAAAAATTTTGCCAAGAAACAGATAGGAGGTTGAGAGAAATTTTTGAAAAT
CAACACAACATCATCAAAAAAGTCGGAAGACAAAGCACTATAGTGGAGATCTTTGATTGT
TTACAAACCGACAGCGAAAACGAAAAAAAAGAAATTAAAAAATCTTGGCGGTACAAACCG
AAGCGAACACCTACGTATTGCAATATATGTAGAATAGATTTTAAAACTTTAGAAAAATTC
AGCGAACACAGTTCTCAAGAGCACGGCATCGAAAGTGGGCTGTACAAATGTTTTGGTTGC
GAGAAGAGGTTCAAAAATCGAAAAACGAGACTTGGCCATGAGCTGAAAATTTGTAAAAAT
CTTAAAAATGGGTATAGATGTGGCATTTGTAATAGATATCTCCCGAGACGAGGCTTGTAC
GAGACACATATGAGAGACCACAGAGGGAATGTACCAATGAAGCTTCCGAATGAGCTATTC
AAGTGCAGAAAGTGTGACAAAGTGTTTGACACAAACGACAATCTCTCGAGACATGTCTCC
GAACATGACTTGAATGAGGACAATTATATATGTGAGAAATGTGGTCGCGTATTCACAAGG
AAGGACTACCTGCACAAGCACAAACTAACGCACACAGGCGAAAAACAGCACACATGTCCG
CACTGCGACTTCCGGACGATACAGAGGTCGTCGCTGATTGTTCATATAAGGAAGCACACC
GGCGAACGTCCCTACAAATGTAGCGTGTGTCCGCAACGGTGCATCTCCAGTTCAAACCTG
AGAGCACATCAGCAAAGACACTTGGGTCTCAAAGTTCATGAGTGTACAATCTGCAATAAA
AAATTCGGTTATAAAATAAGTTTAAAAGAGCACATGTCGACGCATGCTCCGTCGAGTTAC
TCTTGCGATCAGTGCAGCTCGACTTACTCGAGATTGAGAGGGTTAAGGCGACATGTGCTG
ACGAAACATGGAACCAGAAAGGAGGGACTATGA
Protein sequence:
MSVDLLHSDSYNFSYFQQDDVCRLCWSRNAFTQIIEISPNMSCGNENYFQKITECLDIDL
TKYDHPNKACDSCLDQINKFHDFKKFCQETDRRLREIFENQHNIIKKVGRQSTIVEIFDC
LQTDSENEKKEIKKSWRYKPKRTPTYCNICRIDFKTLEKFSEHSSQEHGIESGLYKCFGC
EKRFKNRKTRLGHELKICKNLKNGYRCGICNRYLPRRGLYETHMRDHRGNVPMKLPNELF
KCRKCDKVFDTNDNLSRHVSEHDLNEDNYICEKCGRVFTRKDYLHKHKLTHTGEKQHTCP
HCDFRTIQRSSLIVHIRKHTGERPYKCSVCPQRCISSSNLRAHQQRHLGLKVHECTICNK
KFGYKISLKEHMSTHAPSSYSCDQCSSTYSRLRGLRRHVLTKHGTRKEGL