| New model in OGS2.0 | DPOGS210909 |
|---|---|
| Genomic Position | scaffold853:- 7534-29431 |
| See gene structure | |
| CDS Length | 873 |
| Paired RNAseq reads | 243 |
| Single RNAseq reads | 679 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003091 (7e-90) |
| Best Drosophila hit | spire, isoform E (8e-54) |
| Best Human hit | protein spire homolog 1 isoform c (5e-45) |
| Best NR hit (blastp) | PREDICTED: similar to spire CG10076-PB [Tribolium castaneum] (2e-71) |
| Best NR hit (blastx) | PREDICTED: similar to spire CG10076-PB [Tribolium castaneum] (2e-66) |
| GeneOntology terms | GO:0007316 pole plasm RNA localization GO:0007315 pole plasm assembly GO:0007304 chorion-containing eggshell formation GO:0048477 oogenesis GO:0030036 actin cytoskeleton organization GO:0003779 actin binding GO:0045451 pole plasm oskar mRNA localization GO:0008270 zinc ion binding GO:0016192 vesicle-mediated transport GO:0030717 karyosome formation GO:0045010 actin nucleation GO:0005737 cytoplasm GO:0008017 microtubule binding GO:0030029 actin filament-based process GO:0005938 cell cortex GO:0005515 protein binding |
| InterPro families | IPR003124 Actin-binding WH2 IPR011019 KIND |
| Orthology group | MCL10342 |
Nucleotide sequence:
ATGATGAGCGTCCTCGTGGAGTTGGTGGTGAATCTGGCAATTGTTGTGTACCATGCCTTG
GACTACACGCACGGCGAGGATGAGGAGCGGCTCATCTCTCCAGACCTGGAGGGCCTCATC
ACAGATATGACGGGCAACATTACAGATGACGAGGAAGAGATCAGCGGTCTGTCCGAGGGT
TCGGAGACGTCGGAGGGTGGACGAGCAGATACTGATGATGAGGGCATCGAGAGGGACTCG
GAGCCGGCGCCGAGGAGGCGACGCGTCCGGAGGTTTCTATTGAAAGACGTTATAGAGCGT
TGTATATGGCACTGCGGCGGTGGAAGTGGTCGATTGGCTCGTGAGACGGCCGCTGGTCAC
TACCGCGCCGTCTGCCGGGCGCTGGTCGCCGAAGCCCTCGAGCTGGCCTCGTTCCTGGCC
CGTGTTCGTGTCACAGGAGCCAGGGACCTCGGAGCCGCTGAGGACTCCGCCACTCATCTC
GACACTCTGCAGTTCTCAGATTGGGCGCGGTTCTGGATGCAAGTTATCGGGGAGTTGCGA
ATGGGAGTGAAACTGAAGAAGGTTAACTACTCACGGACGCCAATAGAATATGAATTGACT
CCATATGAAATCCTCATGGACGATATAAGGTCGAGGCGGTATACGTTAAGGAAAGTTGAT
GGCGCCATACCTCAGAATGTTAAGAAGGACGCACACGCAATGATACTCGAATTTATTAGA
AGTAGACCGCCGCTCAAGAAGGCATCAGAACGCAAGTTGGCCCCGGTCCGTCGCGAGGTG
ACTCCAAGGGAACAGCTGCTAGCTTCCATACAACTCGGGAAACAGTTGCGACCTACGACG
CAATCCAGGAGTATATGTGAGTTTTTTAATTAG
Protein sequence:
MMSVLVELVVNLAIVVYHALDYTHGEDEERLISPDLEGLITDMTGNITDDEEEISGLSEG
SETSEGGRADTDDEGIERDSEPAPRRRRVRRFLLKDVIERCIWHCGGGSGRLARETAAGH
YRAVCRALVAEALELASFLARVRVTGARDLGAAEDSATHLDTLQFSDWARFWMQVIGELR
MGVKLKKVNYSRTPIEYELTPYEILMDDIRSRRYTLRKVDGAIPQNVKKDAHAMILEFIR
SRPPLKKASERKLAPVRREVTPREQLLASIQLGKQLRPTTQSRSICEFFN