| New model in OGS2.0 | DPOGS210919 |
|---|---|
| Genomic Position | scaffold853:+ 79431-87839 |
| See gene structure | |
| CDS Length | 3420 |
| Paired RNAseq reads | 2171 |
| Single RNAseq reads | 4982 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003069 (0.0) |
| Best Drosophila hit | relative of woc, isoform B (9e-144) |
| Best Human hit | pogo transposable element with ZNF domain isoform 5 (1e-17) |
| Best NR hit (blastp) | PREDICTED: similar to CG8092 CG8092-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG8092 CG8092-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005622 intracellular GO:0003677 DNA binding GO:0005515 protein binding GO:0043234 protein complex GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL16532 |
Nucleotide sequence:
ATGATGGAAATGCGAAAGGAAACGTCTCCTATACCTCCTCAAGCGGAGATCATAGAGGCC
GATTTATATAAACGATCATATTTTGGACCTGATGTTCCAACTTTGGAGCTAGAATGTTGG
GAGGAAGAGTTATCTGAGGCTCAACTGAAAGCCTATCAGACTGCCACTGAGGAGTATCAA
AGTATTCAAAACAAACTTGATGTGATTGTAAAAGATACAGGAGGAGAGATTGTTTACAAT
GGTGATCAATTTACAGCATACCAATTGCTGGGCAAACAACCAGCTCTAAAGGATTTGGAG
AGACAGAGTGCTGATATAATCAGATCTAGATCACGTTCCCTCTCCATATGTAAAGAAACT
AAAGAAGTCAAAGGAAAAAGAGGTCGACCCAGAAAGAATCGCGAAGAAGATCGGGATTAC
TCCCCGTCATCAGACAGGACAAAGTCACCCGATCAAAGACATAAGAAGAAAAAGAAGGAC
AAGAGGAAGTATGATGAGAGGGATACGAAGACCAAGGATAAAACTTTGGCTCCATCCAAT
GTTCACAGCGTTGTAACAAACGTCCGGCCGTCCGAGGCGACCGCCATCGGTGGCTTACTC
ACCGGCAGCGCGACCAAAACAACGGCCATAGTCGACTTGACCAAGGAAGACGGCAACAAG
AATGTGGCCGATTCCAGAGAGGTGTCGTTCAATAAACTGCAAGGCAAAACATTCCCGTCG
TTGGTGGTGGTGGCCCGGCCGTACCTGCGTTCCAAGGACGCGGCCGTGCCCGCTGATCGC
GCGACCCTCGATAGTAAAGTCAAAGCGGTTCTCATCCACACTCCCATGAAGTTCACCGAG
TGGCTCATACAACAGGGTCTAGTGCGGTCAGAGCAGTGGTGCGCTCTACATCCCGGGAAC
AAACTCAAGCTAGGTATGTATTCTGACGTGTCTAAGTTCCCGTACTCGGGCGGCTACGTG
TGGATATCCGAGTGCTGTCCTACTCGATTCGTCTCCGTGTTCTCGAGCTCTATCTTCGAA
GGAGCCACGTTTCCGCCCAGTGTCCTCCTGAAGCTCATATACCACTGGGCGTGTCAGACG
AACGTTCAGAACGTCGTCCAGTGGGTCAAAGTTGACAATCTATACGTCAAAGGTCTGTTT
ACTTGGTTGAGAGCGGTTTGCACGTCGGCTATACATCAGCACATGGGTCTGCTCGGCGGC
CCGGGGAAGAAGGTTGAAGTTGGAGTCATATCTTTGGGTACCACCAGCCATGATGGCACA
CAGAGACAAGTCAAAGTTGAAGTGTTGGGTGTGCTGGATCCCGTCGAGAAATTGATTCGC
CTTCGTGCGGTGGAGCCGTTGGCGGAGTACGAGAAGAATTATAAGAAGCGTTTCCAGAAA
ATTCTGGAGCCTCTCACCACTTGGGTCCATCCGTCGTCTATAATTCTGACGGATCTGACC
GTGGACAAAGGCACGCTTGTGTCCATGGGCTTTAAGACGGTCCACCAGTCCTCGTCTCAC
TCCGACCAACCCATGAAGTACAGCAACGCCAATATCATGGAATATTTACGACGTATCGTG
CCGAGAATGTTCCAGAACACTCTGTCGCTGCTGTCCAGGCAGATTATACAGCAGTTCCTC
GACGAACTGGTGTGGAGAGAAAAGTTCGGTGTGTCTCCCGGGCAGGCGTTCGACAACATA
GTGTCCCACATATCAGAGCAAACAAAATTGGACGCTAAGGACCCCATCACTATACGGCTC
TACAAAATCGCTTCTAATCCATTCAAAAACTGGAAGTACCCCAGCAAGAAAAAGGATAGA
TCGGAAGAATCTTTAGAACCGGAAGTGAGAAGCAAGCGCGGTAGAAAGAAGAAAGAGCGC
TCGCCCTCACCGCCGCCTAAGAAGAAGAGAAGTAAGACTTATATAGAAGACGAGGACGAC
GAAGAGATTCCACTGGCGCTGCGGCGGTCGAAAGTCAAGCAAGAGAAGAATAAAGACTCC
GACGGCCGGCGGCGCAAGGCGCGGGCTTACGTCGACGACGACCTGGACGACGTGCCGCTG
AAGAACATCAAGAAGGAGGTCAAACACGACGACACCGTCTCCCTCGAGAGGTTCTACTAC
GGCAGAACGACCGAGGGCCTCGCCGAGAACATCGCCATAGCCGTGCAGTGTCCGGCGTGT
CAGGTAGAGTTCAACGAGTCGATGTCGCTGTGCGTTCACCTGTGCGGGCACGTGTCGCGG
CGCGCGGCCGGCGTGCTGTGCGTGTTCTGTCAGAGCATGTTCGACAGTGAAGCAGAGCTG
AGCGAGCACCTCAAGTGTTCTCACCCCGTGGACACCAAGTCACCCGAACTCTTCACCTAC
GCCTGCCTCATATGTGAGGTACGTTTCGCGGCGGTGCTGACCCTGGCGGCTCACATGCAG
AAGGCCCACTGTCCGCGCGAGCTGCCCTACAGCTGCGGCTCGTGTCCCTACCGCGCCTCC
GCCCACCGCTCACTGCTGGAACACGTCATGAACAAACATCGCCGGTCCGACAAGCTAGTC
TGTCCGCACTGTCTCAAGATGATTCCAGTGTACGCCGACGGATGTGAACTCACAGCCAAC
GTGCTCCTCTACATGGACCATCTCAAGCAACACCAGGACAAGGAGCTGGAGATCAAATGC
ACGAGATGCGTGCTGAGATTCGTACATCTCGGTCAACTGAAAGAGCATCAGATTCGCGAC
CACAACCCGTGCGAGGAGGTCCTGCCTCTGTGTTCTACTGAGCACTTGATTAACCTGCCC
AAGAACAAAGCCCGCCCTCCCATCAAGGACGTCGCGTGTCACGCCATCAGCGACACGTAT
GAAGGTGTCACGTTGTTCCTACAGGACGGTCTTCTGTGTCGCGAGTGTGACACGCCGCTT
GACAGTGACAAACACTTCCTCGGTCGCACGTCGTGCAGCAAGTGTCCGTATGCTACATCA
TGTTACCGAGCGATGTTGAGACACAGTGGATACTGCGCCGGCCCACATTCACTAGAGGCC
GCCCCTAGACCCGCGCCCATGCTCTACTGCGTATGTGAATACTCTACAGACATAGGCACG
GACATGCTGTCCCATCTTCTCGCTACACAGCACACAAGCGCCTACTTAAGTGAGGAACTT
GCACGAGCCAACACTGTCAGGGAGGAACCAAAACCAGCTGATGAAGTGGAGCCTCTTGTG
GAGAACATGCCAGCTATCCCAGATTACGCTCCTCCATCGGTCATCAACACTCAGCTGTCT
CTAGATGATCTTGCTCCCCCTTCAGTTTTACAACCTGATCAGCATGATCAAGAACTCCTG
AAGGACGCATATGACCGCCCCCTGGCAACACCAAGACATGAGGAACCTCACTACACTCTC
GGAGACTTTGAACCATTGCCTCAAGAGCCACCTCCCCAACCAGACTTTGAACAACTGTAA
Protein sequence:
MMEMRKETSPIPPQAEIIEADLYKRSYFGPDVPTLELECWEEELSEAQLKAYQTATEEYQ
SIQNKLDVIVKDTGGEIVYNGDQFTAYQLLGKQPALKDLERQSADIIRSRSRSLSICKET
KEVKGKRGRPRKNREEDRDYSPSSDRTKSPDQRHKKKKKDKRKYDERDTKTKDKTLAPSN
VHSVVTNVRPSEATAIGGLLTGSATKTTAIVDLTKEDGNKNVADSREVSFNKLQGKTFPS
LVVVARPYLRSKDAAVPADRATLDSKVKAVLIHTPMKFTEWLIQQGLVRSEQWCALHPGN
KLKLGMYSDVSKFPYSGGYVWISECCPTRFVSVFSSSIFEGATFPPSVLLKLIYHWACQT
NVQNVVQWVKVDNLYVKGLFTWLRAVCTSAIHQHMGLLGGPGKKVEVGVISLGTTSHDGT
QRQVKVEVLGVLDPVEKLIRLRAVEPLAEYEKNYKKRFQKILEPLTTWVHPSSIILTDLT
VDKGTLVSMGFKTVHQSSSHSDQPMKYSNANIMEYLRRIVPRMFQNTLSLLSRQIIQQFL
DELVWREKFGVSPGQAFDNIVSHISEQTKLDAKDPITIRLYKIASNPFKNWKYPSKKKDR
SEESLEPEVRSKRGRKKKERSPSPPPKKKRSKTYIEDEDDEEIPLALRRSKVKQEKNKDS
DGRRRKARAYVDDDLDDVPLKNIKKEVKHDDTVSLERFYYGRTTEGLAENIAIAVQCPAC
QVEFNESMSLCVHLCGHVSRRAAGVLCVFCQSMFDSEAELSEHLKCSHPVDTKSPELFTY
ACLICEVRFAAVLTLAAHMQKAHCPRELPYSCGSCPYRASAHRSLLEHVMNKHRRSDKLV
CPHCLKMIPVYADGCELTANVLLYMDHLKQHQDKELEIKCTRCVLRFVHLGQLKEHQIRD
HNPCEEVLPLCSTEHLINLPKNKARPPIKDVACHAISDTYEGVTLFLQDGLLCRECDTPL
DSDKHFLGRTSCSKCPYATSCYRAMLRHSGYCAGPHSLEAAPRPAPMLYCVCEYSTDIGT
DMLSHLLATQHTSAYLSEELARANTVREEPKPADEVEPLVENMPAIPDYAPPSVINTQLS
LDDLAPPSVLQPDQHDQELLKDAYDRPLATPRHEEPHYTLGDFEPLPQEPPPQPDFEQL