| New model in OGS2.0 | DPOGS208489 |
|---|---|
| Genomic Position | scaffold5842:- 265-5561 |
| See gene structure | |
| CDS Length | 951 |
| Paired RNAseq reads | 28 |
| Single RNAseq reads | 140 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010340 (1e-09) |
| Best Drosophila hit | glass, isoform A (3e-22) |
| Best Human hit | zinc finger protein 782 (3e-29) |
| Best NR hit (blastp) | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein dp) (ZNF-dp) [Acyrthosiphon pisum] (8e-33) |
| Best NR hit (blastx) | zinc finger protein 2 [Rattus norvegicus] (9e-40) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005739 mitochondrion GO:0005622 intracellular GO:0008270 zinc ion binding |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGGGCTGGCTCAACCGGGCACAATTGGAGGCAGATCTTCCTCAACAAATTTGTGACACA
TGTTATGATGATTTATTACAATGTTATAAACTTAGAAAAAAATCATTGAAATCAGAACAA
ACACTGAGGAAAGTGTTGAAATTAGATTCCGGATGCTGTTCTGATGATATAAGTGTGACA
ATAATGACAAAGGAAAAGGGAATACAGACTGATTATAATGATTTGATTAAATTATGCGAA
GAGAATGGTCCAAGAAGGATTAACTTTAAGGACGAAGATTTTAAAACAGAGTATGAAGAA
AATCATGAGAGGAACCGTTTCCGTCGTCACATCCGCCGTCACATGGCGTGCTGGAGGCTG
GCCTGTGACGCGTGCGGCAAGACCTTCGCTGAGCCGTGCGCGCTACGCAGACATGCGCGT
GTTCATACCGGCGAGAGGAAAGAGAAGACACTGCGCTGCGACATCTGTGACAAACGTTTC
AGCGACCGCACCCAGCTAGCGACACATTCCACCCGTCATAGCGGCCTCATGCCCTGTTCG
TGTTCCGTCTGCGGTAAGGCGTTTCCATCTCAGAGATTGCTCGCCTCGCACGCTCGTGTA
CACTCAGACTTGAAGCCCTACGCCTGTCTCTACTGTGACAAACGATTCAGGCACGAGTCC
ACCAGGAACACACACCACCGCACCCATACCGGCGAAAAGCCATACGTATGTTCCATATGC
GGAAAAACCTTCATACAGAACTCTAACCTCAAGCTGCACATGAGGACTCACACGGGTAAC
TACAGCTCAACTTCAGCTCCTTACAATATTGAATTAAACAGATTTTTGTTAACTTCTGTT
CTTGCAGGTTCGCTCGAACTCACATATCTACTCATCTGCGATCTCACTCTGGCGAGCGAC
CTTTCGCTTGTTGCGCTTGTCCACGCGCGTTTATCAGTGCCGCGAGGCTGA
Protein sequence:
MGWLNRAQLEADLPQQICDTCYDDLLQCYKLRKKSLKSEQTLRKVLKLDSGCCSDDISVT
IMTKEKGIQTDYNDLIKLCEENGPRRINFKDEDFKTEYEENHERNRFRRHIRRHMACWRL
ACDACGKTFAEPCALRRHARVHTGERKEKTLRCDICDKRFSDRTQLATHSTRHSGLMPCS
CSVCGKAFPSQRLLASHARVHSDLKPYACLYCDKRFRHESTRNTHHRTHTGEKPYVCSIC
GKTFIQNSNLKLHMRTHTGNYSSTSAPYNIELNRFLLTSVLAGSLELTYLLICDLTLASD
LSLVALVHARLSVPRG