New model in OGS2.0 | DPOGS205789  |
---|---|
Genomic Position | scaffold927:- 21749-28281 |
See gene structure | |
CDS Length | 1815 |
Paired RNAseq reads   | 182 |
Single RNAseq reads   | 460 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013006 (0.0) |
Best Drosophila hit   | CG9503 (3e-122) |
Best Human hit | choline dehydrogenase, mitochondrial precursor (7e-65) |
Best NR hit (blastp)   | PREDICTED: similar to CG9503-PA [Apis mellifera] (7e-142) |
Best NR hit (blastx)   | PREDICTED: similar to CG9503-PA [Apis mellifera] (1e-138) |
GeneOntology terms    | GO:0016614 oxidoreductase activity, acting on CH-OH group of donors GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
InterPro families    | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR012132 Glucose-methanol-choline oxidoreductase IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal |
Orthology group | MCL10046 |
Nucleotide sequence:
ATGATGCAAACCGTAGCCTCGAATTACAATCCCACGAATGCAAACGATCCATTTGATTTT
TTGAGAGATTCATATCCATTGCCCAAAGGTTACAACGAGCCCTTAAATGAATATGACTAT
GTAATAGTCGGCGCTGGTTCTTCTGGCTCAGTTCTAGCAGCTCGTCTTACTGAAGATAAA
CCTCGGGCCTCCGTCCTGCTAATAGAGGCTGGCAAGCCGGAGATGTTACTCTCAGATATT
CCCGCTTTGACCCAGTACCTGCAACAGACAGATTATGTCTGGCCTTATACAATGGAGCAC
CAACCTGGTGTTTGTATGGGCAGTGAAGAGCAGAGATGCTATGCACCTAGAGGCAAGGCA
ATTGGTGGGACGAGTGTCACAAATAGTATGTTCTACACGCGAGGCAGACCACAGGATTGG
GATAGGATTGCAGCTGACGGAAACTTTGGATGGTCATACGAAGAAGTATTGAAATATTAC
ATGAAATCTGAAAGATCCGAGCTCAAAAAATACAGAGACCAACCCTATCGCGGCCGTGAT
GGAGAACTTACAGTAGAGAACGTCCCATTCAAAACTGGTTTAGTTGAAGCGTTTCTTGCA
GCTGGGAGGATGTTGGGCCATCCAACAATCGATTACAATGCTCCAGATCAATTAGGTTTT
GGATACGTTCAAACGATAACTAACAGAGGTCATCGTCTAAGTGCTGCAAAGGCGTTCCTG
CATAGACACAAAGGGCGCAAAAATTTACATATATTGAGTGAAGCTAAAGCTACAAAAGTC
ATAATTGATCCGCAAACAAAGAAAGTTTCAGGAGTTGAATATATAAAGAATAACATTAAA
CACAGAGTAAACTGTAGACGAGAGGTTATTCTGTCAGCTGGACCTATTGGTTCACCCCAA
TTACTTATGCTCTCGGGAATAGGTCCCAAAGAACACTTACAGACTCTAGGGATACCTGTT
GTTATGGACCTAAAAGTTGGAAGAACTCTTTACGATCACATCGGTTTTCCTGGTGTAATA
TTTAAGCTGAAAAGTACTAACGCTAGTTTATTGGAACCCAAGGTTGCCACATTACCAAAT
CTAATGCAGTGGCTTCAGTTTGGCGATGGATTACTCGCTTCACCTGGTGGAGTTGAGGCG
ATTGGATATCTAAAAACAGCATTATCAGAAGATCCTGAGTTGGTTCCCGATATTGAACTT
TTAAGTATGGGTGGTTCAATCACTCAAGATTCAGGAGGTGCGATAAGAAGGAGTATGAGG
ATATCTGAAAATACATATGCTCGAGCATTTCACACATTAAATGGTATGGATACTTGGCAG
GCTATACCAACACTTCTTTATCCCCGATCCAAAGGATATATGGAACTGCGAGATACCAGT
CCATTTTCACATCCAAAACTATACGGAAATTATTTAACTGATCCAAAAGATTTAGCGACG
TTAAAAGAAGCAGTAAAGCATATAATACAATTGGGAGAATCTCAACCATTCAAAAAATAC
GACGCAACTTTACATTTACCGCAATATCCCACTTGCTCAACATATCCCTTAGGTTCTGAT
GCTTACTGGGAATGTGCTATTAGAACCTTGATCGTATCTTTCCACGAGCCAATCGGTACG
TGCAAAATGGGACCATCAAATGATTTTGAAGCCGTTGTAGATAATAACCTAAGGGTGTAC
GGTATTGAAGGTTTAAGGGTTGCCGATGCTAGCGTTATTCCTCGACCCATTGGTGCCAGA
ACAAACGTTCCTGAAATTATGATTGGAGAAAAGGCAGCTGATTTGATAAGGAATACGTGG
TCAAATAACGTCTAA
Protein sequence:
MMQTVASNYNPTNANDPFDFLRDSYPLPKGYNEPLNEYDYVIVGAGSSGSVLAARLTEDK
PRASVLLIEAGKPEMLLSDIPALTQYLQQTDYVWPYTMEHQPGVCMGSEEQRCYAPRGKA
IGGTSVTNSMFYTRGRPQDWDRIAADGNFGWSYEEVLKYYMKSERSELKKYRDQPYRGRD
GELTVENVPFKTGLVEAFLAAGRMLGHPTIDYNAPDQLGFGYVQTITNRGHRLSAAKAFL
HRHKGRKNLHILSEAKATKVIIDPQTKKVSGVEYIKNNIKHRVNCRREVILSAGPIGSPQ
LLMLSGIGPKEHLQTLGIPVVMDLKVGRTLYDHIGFPGVIFKLKSTNASLLEPKVATLPN
LMQWLQFGDGLLASPGGVEAIGYLKTALSEDPELVPDIELLSMGGSITQDSGGAIRRSMR
ISENTYARAFHTLNGMDTWQAIPTLLYPRSKGYMELRDTSPFSHPKLYGNYLTDPKDLAT
LKEAVKHIIQLGESQPFKKYDATLHLPQYPTCSTYPLGSDAYWECAIRTLIVSFHEPIGT
CKMGPSNDFEAVVDNNLRVYGIEGLRVADASVIPRPIGARTNVPEIMIGEKAADLIRNTW
SNNV