New model in OGS2.0 | DPOGS214868  |
---|---|
Genomic Position | scaffold1097:+ 16075-19742 |
See gene structure | |
CDS Length | 1707 |
Paired RNAseq reads   | 1295 |
Single RNAseq reads   | 3363 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010077 (6e-28) |
Best Drosophila hit   | mind the gap (1e-57) |
Best Human hit | ND |
Best NR hit (blastp)   | PREDICTED: similar to CG7549-PA, isoform A [Apis mellifera] (1e-72) |
Best NR hit (blastx)   | PREDICTED: similar to ENSANGP00000017386 [Nasonia vitripennis] (1e-65) |
GeneOntology terms    | GO:0050807 regulation of synapse organization GO:0007274 neuromuscular synaptic transmission GO:0008061 chitin binding GO:0006030 chitin metabolic process GO:0007416 synapse assembly GO:0043083 synaptic cleft GO:0043195 terminal button GO:0005576 extracellular region |
InterPro families   | IPR002557 Chitin binding domain |
Orthology group | MCL16225 |
Nucleotide sequence:
ATGATGAGGCCGGTGGCACCCGTCACAAAACCGAACCAGGCGTCGATGGACAAGTTGTCA
TCCTTACACAGACGTGTTTCAACCATGGATCCTATCGTGGTTCCCAGCCCCGAGACGCCC
GTCTTCAAACCGCAACCCGCGGTAACCATGGCTAAACCCATGCCCATGGGCATACCCGCC
TTCAAACCATTACCACCTAAGGAAGAAACCCTGAAGGTGCTCCCAATAGCCGCCAAGAAG
ACGTACTCCCCATGGCCCGTCCCGCAATCCAAACCAGGAACTGTCTACCAAAACCCAGTA
CCTCACCAGGTCCACGACATAGCGAACAGCTATCCAGCTTACAGCACCAAGAAGATAGAC
GATTACAACAGCATCAGCGGCTACAGTGACGACACCGCCTTGAAGTTCAATAAAGAAGAT
ATAGACGCTAAGATAGCCGAGATAGCCAAGGCTGGGAACATCTCCACTGAAGCCGTCGAG
GCGGCTATAGCGCTCAGACAACAGCAGCTGTTGAGCAAATACGCTAACATACCAGCTCCG
ACAACCACTACAACAACGACCACAACAACAGAGACTGTTGTGTATCAAGAACCCGAGCCG
GAAATCATAGTGGCGCCTGTGCCGCAGAAACCGAAGAGAAACCCAACAACAGGCAAAGTG
ATGAACGCCCCTCGCGAGTATTACCCTGTGGGATACGAAAAGAACTTCGATGATCACTTC
CAGTCTAAAGTGGATCTTCCAGACACCAGCTTCCACTGTGGGGATCAGAAATACTTTCCC
GGACTGTACGGGGACGAGACGCTAGGATGTATGGTGTTCCACGTGTGTGCTCTAACAGAC
GACGGGCTGGTGATGAAGTCGTTCCTGTGCCCGGAGTCCACGCTCTTCGACCAGACCATC
CTCAAGTGCAACTGGTGGTTCTACGTCGACTGTAAACACACCACCAGCCTCTACGACACA
AACATACCCGTCTCCAAGAGCTACCAGCTCATGAAGGCCCTCACCTTCTTCACCTCTTAC
AAAAAGGAAATGGAAAATGGTCAGGCCATGAACCCTGAAGATATAGGCGGAGTTAAAGAC
GCCATAACGATACTACAGAACCAAGATGCCAAGACGGCCGAGAGTGAACGCGTACAAGTA
GTGACGTCACATCCGCTCATAGACGAGAGAAGCAGGAGAGACAACTATACAGCACCGGTC
TACAGAGGAACCAGAGAATATAACGAGACAGAGAAAGAGACAGAGAAAGACTTCAAATAT
GTTAGAGTTAGAGCAGACATTAGTTACAGCAACAAGACTAGCAGCACGGAAGAGAAGAAT
AGACGGAGGCTGGCTCACAGAAACAGAGGCGGGGCTGTTACTACTACTACAACTACAACA
ACTACTGCAACTACAAAGAAACATGCTGAGAGTCCACTTGTAGAGATCATGAAGCAAGAA
ATACAACCCATAGAGGTAGAGACCAAGAGAGAGACTCTCAGAGACCAGCTAGACGATACA
GAACAAGACAAGACAGACACCCGACCTGTTAGAAGGTTCTACAGATCGAGTGGAGAGAGA
GGAGATACGAGGGAGATAAGAGGGACAGAGATAGAGATAGTCAACAACGAGAGGGTGCAG
ATTGTGAGACCGGCTAACACCGAGTCTAGACTAGACGACGCGGTGCTAGGCAGGTCTAGA
CACAAGGACAGAGATCAATATACATAA
Protein sequence:
MMRPVAPVTKPNQASMDKLSSLHRRVSTMDPIVVPSPETPVFKPQPAVTMAKPMPMGIPA
FKPLPPKEETLKVLPIAAKKTYSPWPVPQSKPGTVYQNPVPHQVHDIANSYPAYSTKKID
DYNSISGYSDDTALKFNKEDIDAKIAEIAKAGNISTEAVEAAIALRQQQLLSKYANIPAP
TTTTTTTTTTETVVYQEPEPEIIVAPVPQKPKRNPTTGKVMNAPREYYPVGYEKNFDDHF
QSKVDLPDTSFHCGDQKYFPGLYGDETLGCMVFHVCALTDDGLVMKSFLCPESTLFDQTI
LKCNWWFYVDCKHTTSLYDTNIPVSKSYQLMKALTFFTSYKKEMENGQAMNPEDIGGVKD
AITILQNQDAKTAESERVQVVTSHPLIDERSRRDNYTAPVYRGTREYNETEKETEKDFKY
VRVRADISYSNKTSSTEEKNRRRLAHRNRGGAVTTTTTTTTTATTKKHAESPLVEIMKQE
IQPIEVETKRETLRDQLDDTEQDKTDTRPVRRFYRSSGERGDTREIRGTEIEIVNNERVQ
IVRPANTESRLDDAVLGRSRHKDRDQYT