| New model in OGS2.0 | DPOGS216133 |
|---|---|
| Genomic Position | scaffold4809:- 114-2996 |
| See gene structure | |
| CDS Length | 984 |
| Paired RNAseq reads | 120 |
| Single RNAseq reads | 366 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009540 (1e-84) |
| Best Drosophila hit | ND |
| Best Human hit | tetratricopeptide repeat protein 5 (9e-47) |
| Best NR hit (blastp) | PREDICTED: similar to tetratricopeptide repeat domain 5 [Apis mellifera] (6e-68) |
| Best NR hit (blastx) | PREDICTED: similar to tetratricopeptide repeat domain 5 [Apis mellifera] (4e-64) |
| GeneOntology terms | GO:0005488 binding GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR001440 Tetratricopeptide TPR-1 IPR019734 Tetratricopeptide repeat IPR011990 Tetratricopeptide-like helical IPR013026 Tetratricopeptide repeat-containing |
| Orthology group | MCL17638 |
Nucleotide sequence:
ATGTCGAACGATACTGAAGAACCAGCGGAATTGCTGGAAGATGCATCAGAGCTTCTTTTG
AATTTATCTCAAGATTTGCGAGACCTATATTCCTTTAGGGATCTTTTCTTTGAAAATCAT
CCTTTTGAAATGGCATCAGAGAAAAACAAATGTGTTGAAGAGAAAAAACAGAAGTTAGTC
GAGAAATTTGAAAATATTGATGTTGACACACAAATACCATTTTCTCACCGAGCAGAATTC
CTATACTTGAAGGGTAGATGCTACAACATTAGCTCCGTCTATGATCCTCAAGCTGCCCAA
TGCTTAAGCAAGGCGGTGAAACTAAACCCCAATTTAGTTAGTGCCTGGAATGAGCTCGGC
GAATGCTATCTGAAGAATATGAATGTTAAGGAAGCTAAAAATAGTTTTGAAGGTGCTCTT
AAACATGAACGTAATCGCGTGGCACTGCGATGCCTTTCAATAATACTACGTCAAGAAAAC
ACTGGTAGCGCCAGTGAAGCGAAATCTGCGATCTTAGCCAGTGTAGTTATGGCCAAGGAG
GCCGTAGCTCAAGATACAAAGGATGGTATATCGTGGACAGTTCTCGGCAACGCTTATTTA
TGTCAGTTCTTCATGGTCAAACAAGATCCGGCTACGTTGAAACTATGTATGAGCGCTTAC
AAACAGGCCTGGTCGGATCCAATAGCTAGGGGTCAACCAGATTTATATTACAACAAGGGT
GTGGCGTTGAAATATGAAGAGCAGTACAACGAAGCTCTGGAGATGTTCCGCACAGCGATG
CAGCTGGATCCAGGCTGGGCTCCAGCAGTTCGCGAGCTGACAGCTCTCAAGGCACACCTG
GCAGCTGCAACCACACTCGTAAGGACGAGGGGAAGGATCAAGGCCAAGAGACTCGCGAAT
ATGGTGCGAGTAAGTACCCATAAAGACTTCTATCACGTGTATAAAGTCATAATAACATTT
TGCTCAACCTTTCTCTGCATTTAA
Protein sequence:
MSNDTEEPAELLEDASELLLNLSQDLRDLYSFRDLFFENHPFEMASEKNKCVEEKKQKLV
EKFENIDVDTQIPFSHRAEFLYLKGRCYNISSVYDPQAAQCLSKAVKLNPNLVSAWNELG
ECYLKNMNVKEAKNSFEGALKHERNRVALRCLSIILRQENTGSASEAKSAILASVVMAKE
AVAQDTKDGISWTVLGNAYLCQFFMVKQDPATLKLCMSAYKQAWSDPIARGQPDLYYNKG
VALKYEEQYNEALEMFRTAMQLDPGWAPAVRELTALKAHLAAATTLVRTRGRIKAKRLAN
MVRVSTHKDFYHVYKVIITFCSTFLCI