DPGLEAN12764 in OGS1.0

New model in OGS2.0DPOGS201522 
Genomic Positionscaffold993:- 29444-34700
See gene structure
CDS Length1065
Paired RNAseq reads  2064
Single RNAseq reads  5694
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002695 (2e-09)
Best Drosophila hit  staufen, isoform C (5e-23)
Best Human hitdouble-stranded RNA-binding protein Staufen homolog 2 isoform a (3e-15)
Best NR hit (blastp)  staufen [Aedes aegypti] (2e-27)
Best NR hit (blastx)  staufen [Aedes aegypti] (3e-21)
GeneOntology terms





























  
GO:0007316 pole plasm RNA localization
GO:0007315 pole plasm assembly
GO:0045450 bicoid mRNA localization
GO:0007318 pole plasm protein localization
GO:0005938 cell cortex
GO:0006403 RNA localization
GO:0045179 apical cortex
GO:0003730 mRNA 3'-UTR binding
GO:0055059 asymmetric neuroblast division
GO:0005737 cytoplasm
GO:0045180 basal cortex
GO:0045177 apical part of cell
GO:0048477 oogenesis
GO:0046011 regulation of oskar mRNA translation
GO:0007317 regulation of pole plasm oskar mRNA localization
GO:0003725 double-stranded RNA binding
GO:0008298 intracellular mRNA localization
GO:0005875 microtubule associated complex
GO:0008017 microtubule binding
GO:0007017 microtubule-based process
GO:0045451 pole plasm oskar mRNA localization
GO:0008104 protein localization
GO:0019094 pole plasm mRNA localization
GO:0003729 mRNA binding
GO:0046012 positive regulation of oskar mRNA translation
GO:0007616 long-term memory
GO:0007400 neuroblast fate determination
GO:0045167 asymmetric protein localization involved in cell fate determination
GO:0008595 anterior/posterior axis specification, embryo
GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly
GO:0000932 cytoplasmic mRNA processing body
InterPro families
  
IPR001159 Double-stranded RNA-binding
IPR014720 Double-stranded RNA-binding-like
Orthology groupND

Nucleotide sequence:

ATGTTGAACGAAACGATTTTCTTTACTGTTTGCCAAAAAATAATTTATGCGTGTATTGTG
AGCGGATCTATACCGATCGTGAAGCCGGATTATTTAATAATTTGCTGCGATCGTAAGATG
ATGCATCACCCGAACATTCATCATCAGCCGATGTCGGGACACCCGCAGCACATGCCGGCG
CACCAGCCCATGCCCGCCCACCATCAACTGCCGCACCAAATGCACCGGGAGAACAGGCAC
GTAACTCTCACTAGGGTGCCGTTGGGTCCGTCACAGGCGGGCGGTATGGGCGCCCACGCT
CAGCTCGGCGGCATGGGCGTGCATCACGCCCACCATGGGCGACCGCACACCATTCGCGCC
GTACACCATCCGCCCACGCAACACCATAATGTACCAACGCCGACCCGTCTCCGTCGTCCT
TACGGCGGTGGCTACACTCCCGGAGTGGTTCCCTTCACACAGCCGCCGCCGATGCCGCCT
CCTACTACGCAACAAAACCACAATGTGGTATCGGGAGTCAATACCAAAACGCCAACACCG
ACAATCGAAGCCAAAGAGAGTTTAGCGTCCCCCACCGGCACTGAAACTTCCGGTACTGGC
ACTGGCACTGGCAATGGCAATGGCAATGGATCTGGCACCAGCACTGACGCGGATATTGAC
GACAAGGACAAGGCCTCGGTAGAGGCGACCGACTCCGAGACACGCTCGACCGCCTCGGCC
AACAGTAAAGAGAAGACACCAATGTGCTTGGTCAATGAACTTGCCAGGTACAATAAGATT
AAGCATCAGTATCGCCTCACATCAGAGACGGGGCCCGCTCACAAGAAAGTATTCACAGTG
ACACTCAGACTCGGTGACGCTGAGGAATACACAGCTGAGGGGTCTTCAATAAAACGCGCC
CAGCACGCGGCGGCTAGCGCGGCTCTGTCGGGCACACGCTACCCCCCTCCCCCGCCGCGC
GCCCCCCCGCCGCACACACACCACGCACACCACCACAAGCACGCCGGTGACGTACATTAT
ATTATGAACTATATCACACGGCCATTACGGAACCTTTACTCCTAA

Protein sequence:

MLNETIFFTVCQKIIYACIVSGSIPIVKPDYLIICCDRKMMHHPNIHHQPMSGHPQHMPA
HQPMPAHHQLPHQMHRENRHVTLTRVPLGPSQAGGMGAHAQLGGMGVHHAHHGRPHTIRA
VHHPPTQHHNVPTPTRLRRPYGGGYTPGVVPFTQPPPMPPPTTQQNHNVVSGVNTKTPTP
TIEAKESLASPTGTETSGTGTGTGNGNGNGSGTSTDADIDDKDKASVEATDSETRSTASA
NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGDAEEYTAEGSSIKRA
QHAAASAALSGTRYPPPPPRAPPPHTHHAHHHKHAGDVHYIMNYITRPLRNLYS