| New model in OGS2.0 | DPOGS209375 |
|---|---|
| Genomic Position | scaffold151:- 167498-169776 |
| See gene structure | |
| CDS Length | 930 |
| Paired RNAseq reads | 568 |
| Single RNAseq reads | 1787 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002288 (1e-07) |
| Best Drosophila hit | ND |
| Best Human hit | neurocan core protein precursor (2e-07) |
| Best NR hit (blastp) | C-type lectin 21 [Bombyx mori] (1e-86) |
| Best NR hit (blastx) | C-type lectin 21 [Bombyx mori] (2e-87) |
| GeneOntology terms | GO:0005529 sugar binding GO:0005488 binding GO:0016020 membrane GO:0004872 receptor activity GO:0016021 integral to membrane GO:0006897 endocytosis |
| InterPro families | IPR016187 C-type lectin fold IPR001304 C-type lectin IPR016186 C-type lectin-like IPR018378 C-type lectin, conserved site |
| Orthology group | MCL19405 |
Nucleotide sequence:
ATGGCTGATTGCCAACAGTTCAGATCTGACTACAATTACCACTATGAGAGTAACGGTTGG
CTCAAACTGCATCGTATTCCTGCTACGTTTCACGACGCCTGGCTGAGATGCAATTTGGAA
GGTGCTGTTCTGGCTTCACCTAGTAACGTATTCATAGAGTCAGCAATCCGGAAAGAGATG
AAAAACTGCAACGTGGCCACCAGCGGTATCCTTACAGGGATTCACGCCACATTCTCTAAA
GGCGACTTCTTTTCAATAGAAGGAATACCTTTAAGGAACATGCCGGTGGAGTGGATGCCA
GTTGAACCTGATAATAAAAATAACGAAGAGGATTGTGTTCTGTACATAGCCAATGGGACC
ATTGCCGACATCACCTGCTCTGAGCTTCACCCGTACATCTGTTACAAGGAGAACAACAAA
AACGTTGTCGTAAATGGATGCGGAACTGTTGACAGGGAATACAATTTGGACACAAGAACA
GGAAAATGTTATAAATTTCACAAAGTGGCCAGGAACTGGACACGAGCCTTCATGACCTGT
GCCGCTGAGGGCGGACATCTTGCTATCATTAACAGTGAGACGGAGGCTGCAGTACTGCAA
GAACTGTTCGCGAGACACCCTCAAAACACCATCAAGTCCAATCTTCGTCCAATAATGAGG
GACATTATACATGTTGGCTTCCACGATTGGTCCGAAAGGGGAATTTGGACTACCATCCAT
GGTCAGTCCCTAGTCGAAGCTGGTTTCGACCTCTGGTCGGAGAATCAACCGGATAATGCG
GGACCTGGAGAGTACTGCGGTGGGATGTTCAGACACGGGAGGCTGGACGATGTGTGGTGT
AACGAGAGGGGACCCTTCGTGTGTGAAAAAAGGCCGGAGAGTCTGCAGGAAGAACCTGAT
ATATACAAAGAACTCCTCGGAAAAGAATAA
Protein sequence:
MADCQQFRSDYNYHYESNGWLKLHRIPATFHDAWLRCNLEGAVLASPSNVFIESAIRKEM
KNCNVATSGILTGIHATFSKGDFFSIEGIPLRNMPVEWMPVEPDNKNNEEDCVLYIANGT
IADITCSELHPYICYKENNKNVVVNGCGTVDREYNLDTRTGKCYKFHKVARNWTRAFMTC
AAEGGHLAIINSETEAAVLQELFARHPQNTIKSNLRPIMRDIIHVGFHDWSERGIWTTIH
GQSLVEAGFDLWSENQPDNAGPGEYCGGMFRHGRLDDVWCNERGPFVCEKRPESLQEEPD
IYKELLGKE