| New model in OGS2.0 | DPOGS209370 |
|---|---|
| Genomic Position | scaffold151:+ 150135-154618 |
| See gene structure | |
| CDS Length | 1959 |
| Paired RNAseq reads | 1060 |
| Single RNAseq reads | 2621 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005702 (3e-177) |
| Best Drosophila hit | Nup75 (2e-68) |
| Best Human hit | nuclear pore complex protein Nup85 (7e-74) |
| Best NR hit (blastp) | PREDICTED: similar to nucleoporin 85 [Tribolium castaneum] (6e-139) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (2e-123) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005634 nucleus GO:0015031 protein transport GO:0051028 mRNA transport GO:0005643 nuclear pore GO:0016020 membrane GO:0055085 transmembrane transport GO:0006810 transport |
| InterPro families | IPR006311 Twin-arginine translocation pathway, signal sequence IPR011502 Nuclear pore complex protein, Nucleoporin Nup85-like |
| Orthology group | MCL14310 |
Nucleotide sequence:
ATGAGTTTCTCAAGCTTTTTCCAAAACACATCCCTCGTGAGCGATGAGGCTTCAAAGAAA
CATGTAAAAACATTTGAATTACCCGACAAATGCTTCCAAAAACGTATTGGTTGTGTTTGG
AGACGCGGAAACCAGTTCACTGTATACCCAAGAAGCCAAATTGTTAACAAAACAACAGAC
GAATCTAGAAATAAAACAGATGATAAAATTCTGAATATTCGTCAAGAAGTCGTGCTCTTT
ACCCCGATCTTACGCAAGCTTGTAAACGAAGCCAATGGAACGTACCTGTCTGTTCAGAAA
ATATCTGAAACGTCCAAAACAACAGATAACCAAGTAGACTTTCTCAAGCTTTCGCGCCAA
TACCGGTCTATTATACGCGTCTGTATCGAAAGTTTGCAAGAGGCGGCCAACAGAGAGAAA
GAGGGCATCAACAAGAATACATATCTATCATACCTAACAATATTCTACTCTATAGAATGT
ATTTGGCACCTGTGTGAGATTTTGTATATTGATATAATTCCTGGTGAAGTTGTATTGCCT
TTTCTGTTAGAATGGGTGCGTTTCCATTTCCCTTGCCATGAGCAGACGGCTGCACTTCTG
CTAGAGTCCTGTGAGGTCGGTTCAGAAGACCATAAGGATTATTGGGATACAGTTATTGTG
ATGATTGTCCAAGGCAGGGTTGATGTGGCGAGAGCACTGCTAAAATTACATTCGGCCGCT
GATTCTAATGAATTTAAGCTTATTGACAATTCATTAAGGAGTATGCCCGTTTATAGTGTC
TACGGTGGAATATCAACCGGTGAGTTCACAATATCATGGAAGCATTGGCAGGCGGAGTGT
AGATCTAAGTTGAACAGCAAACTGCTGCAAGATCCTCAGCTGGAGCTGGTTATGAGACTG
ATGTGCGGTGAGAGGTCGGCCTTCGAGTGTGTGTCCGTGAAGTTCAGCTCGTGGTTCGAC
CTGGTCGGAGGCTGGGTGTTGTGGACCGCGCCGTGGACTCGCCGCGGGGAACTAAGCGCG
GCGGCGGCTGCGTGTGCCGCCTTCACACACACCCGGGGACCCCTGGAACAGATCGTACGA
GCCTTACTCGACGGTGACCTCCATCAGGTGATCCGTGAGGTCCAGCAGATATCGGACAAC
AACTGGTTCGCCGCGCACCTCACGGACATGTTGCACCACTGCGGCAAGCTGCGGATACTA
GACATACACCAGGCCGATGTGACGTCACGGCTGCGAGACAGCTTGATTCTGGAGTATGGC
TCGCTGCTCATGGAACATAAGTCCTTATGGTCAGTGGGTCTGTCGTACCTGTGCGGGACC
CCCGAGGGTGTGAGGAGGGCTGAGCTCATGCTGGAGAGGATGCCCGTGCAGACGGAGGCC
AAAGCAATGAGAATCACCGCCGAGGCCAAGAAGTATGGGCTGCTGGGAGTCGTTCAGTCA
GTAAGTGCATGTATGAGCACACGGCACCTGTCAGGCGGGGCTGAACGGACGGGTGGAGCC
CTAGCGTGGGGGGCGAGGGCTCGCAGTGGGCCGCAGTGCTCCCGGGCGGCACACGCAGCT
CTCCGCGCACACTGCGCTGGTAGGCCACTGCCAGCTGCTGACCTACTCCTCACTGCTGGA
CCTGCCCTGCTCGTAGACGACACACTGCTGCTCCTTGGCAAGTACTGTGATTTCCACAGA
CTATACAAGAGCAGAGAATTCAAAAAAGCGGCAAAATTACTCGTATCCCTCATCACCTCA
AATATAGCACCGGAATATTTCTGGTCTACCCTCCTCCTGGACACACTCCCGCTCCTAGAG
ACAGAGGAGCCGGTGATATCATCAGAAGACACGTATGATATAATGTTGTGTCTGGAGTTA
CGTTCTACCTGCCTCAGTAAAGAGAAGGCGGACTTATTGAGACTGGCACTGGCACGGAAC
CTGGCAAGGACGGTCCTCGTTGATGTCGGAGATGAATAG
Protein sequence:
MSFSSFFQNTSLVSDEASKKHVKTFELPDKCFQKRIGCVWRRGNQFTVYPRSQIVNKTTD
ESRNKTDDKILNIRQEVVLFTPILRKLVNEANGTYLSVQKISETSKTTDNQVDFLKLSRQ
YRSIIRVCIESLQEAANREKEGINKNTYLSYLTIFYSIECIWHLCEILYIDIIPGEVVLP
FLLEWVRFHFPCHEQTAALLLESCEVGSEDHKDYWDTVIVMIVQGRVDVARALLKLHSAA
DSNEFKLIDNSLRSMPVYSVYGGISTGEFTISWKHWQAECRSKLNSKLLQDPQLELVMRL
MCGERSAFECVSVKFSSWFDLVGGWVLWTAPWTRRGELSAAAAACAAFTHTRGPLEQIVR
ALLDGDLHQVIREVQQISDNNWFAAHLTDMLHHCGKLRILDIHQADVTSRLRDSLILEYG
SLLMEHKSLWSVGLSYLCGTPEGVRRAELMLERMPVQTEAKAMRITAEAKKYGLLGVVQS
VSACMSTRHLSGGAERTGGALAWGARARSGPQCSRAAHAALRAHCAGRPLPAADLLLTAG
PALLVDDTLLLLGKYCDFHRLYKSREFKKAAKLLVSLITSNIAPEYFWSTLLLDTLPLLE
TEEPVISSEDTYDIMLCLELRSTCLSKEKADLLRLALARNLARTVLVDVGDE