| New model in OGS2.0 | DPOGS214919 |
|---|---|
| Genomic Position | scaffold5099:+ 13645-19752 |
| See gene structure | |
| CDS Length | 2295 |
| Paired RNAseq reads | 983 |
| Single RNAseq reads | 2120 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014008 (1e-33) |
| Best Drosophila hit | gluon (5e-174) |
| Best Human hit | structural maintenance of chromosomes protein 4 (4e-159) |
| Best NR hit (blastp) | structural maintenance of chromosomes smc4 [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | structural maintenance of chromosomes smc4 [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0007076 mitotic chromosome condensation GO:0000796 condensin complex GO:0000166 nucleotide binding GO:0003677 DNA binding GO:0005634 nucleus GO:0007422 peripheral nervous system development GO:0005737 cytoplasm GO:0000785 chromatin GO:0007067 mitosis GO:0005694 chromosome GO:0000070 mitotic sister chromatid segregation GO:0005524 ATP binding GO:0005515 protein binding GO:0000819 sister chromatid segregation GO:0007052 mitotic spindle organization |
| InterPro families | IPR010935 SMCs flexible hinge IPR003395 RecF/RecN/SMC |
| Orthology group | MCL11845 |
Nucleotide sequence:
ATGCAAAAGACCAAGACAAAAAGAGGTGAAGAACCAATGGAAGTTGACGATAATCAGTCA
CCAACAAGCGATCAAAATGTTAATGATGATGGAGAAATAGATCATATATCCGATGACGAG
GAAGGTGGTATCCGGATAGGTGATATTTATATACCACCAGCGGCTAAGCCGGCTCTAACA
TTTGATTCAACAGGCCCAAGGCTGATTATAACGCATATAGTAAATGAAAATTTTAAAAGT
TACGCTGGTGTGCAATCATTAGGCCCTTTTCATAAGAGTTTTACAGCCATCATAGGCCCA
AATGGCAGTGGGAAGAGCAATGTCATTGATTCCATGCTATTTGTTTTCGGCTATCGAGCT
ACCAAAATCCGTTCAAAGAAGATTTCAGTTCTAATTCACTCTTCTAGTAAATTTCCAAAT
ATAACAAGTGCTAGTGTTGCTGTACATTTCTGTCAGATAATCGATGGGGATGGTGAAGAT
TTCACAGTGGTACCTAATAGTGAGATAGTTGTATCAAGAACAGCGGCCAAAGATAATTCA
TCATATTACACTCTTAATGGAAAGCGAGTCCAGTTCAAAGAGGTTGCTAAAATGTTAAGG
TCCCACGGAATAGATTTAGACCACAACAGGTTCCTTATTTTACAGGGTGAAGTGGAACAA
ATTGCTATGATGAAGCCAAAGGGTTTGACGGAACATGAATCTGGCATGCTCGAGTACTTG
GAAGATATAATTGGTACCTCAAGATATAAGGAGCCGATAGAGAAACTATCAGATAAAGTT
GAAGAATACACCGAAATGCGTAAAGAGAAATTAAATAGAGTGAGATTGGTTGAACAAGAA
AAAAATAAATTGGAACAACCTATGAGAGAGGCCGTTGAACTGATGAATCTAACGAACGCC
GCCTTGAGGACGAGGAATACATTATTACAGAAATATATCCACGAAACTAATAAAATAATT
GAAAACAAAACAAAAGAATTGCAAGAACTTAAAGACGTCTTGGCGAAGATCGATGAGAAA
CTGGCGAGAATAAAAGATGAGCTACATGAAAAAACAACGGAATTGAAGAACGGCACTCAA
AAATATGACCAACTCCAAAAACAAAAGGACGATATATCAGAGAAGTTGACGCAATGTAAG
AAAAAAACTGTCACCGTGCAGGCCGACACGACGCAGGCGAACAAGAAGCGGAAAAATCTG
GAACAGTTGATAGAACAGGAGAAGGGGAAATTAATTGACTTAGAACTCATTCCAGAAAAA
AATAAACACGAGATAGAGGAATGTGAGAAATTATTGGACAAGCACAAAGAGAGTAAAGTT
AATGCTGAGCAAGAGCTACAAACCGTTATGGCTGGGGTCAGATCAAAAACACAAGGTCTC
CAAGAACAAAAAGATAAATTACAAGCAAAACTAATAGACCTAAAGAAAATAGTTGACGAA
GCCAATAAGAACTCGAAGTTAGCCGAGTCCGAACTCAAAATATATTTAAGTACAGAGCAG
AAAGAAATCGAAAAATTTAACAGAATGAAGGAAGTGTATGAGAAAGCCAAAAGCGATTTG
GAAGAGAAAAAATCTCTACGTGAAGATCTTTCCTCTACTATACCAATGCAAGAACAACAA
GTAAAAGAAATACAGACAAAACTACAGCAAATCAAGAAAGAAGAGATGTCTGCATCAAAC
GAAGCGAGGAGCCTGAGAGCACAATTAGAGGAATCCCGTCAAGCCATGAGCGCCAACAGA
TCTAGAGGGAGAGTTTTAGATTGTCTGATGAAGGAAAAGAGGGAAGGAAGATTACCAGGA
ATATTTGGTAGACTGGGCGATCTCGGCGGAATCGATGCTAAATACGACGTGGCCATATCG
ACGTGTTGCGGGGCCTTGGACAACATAGTTGTTGATAGCGTCGAAACGGCCCAACGGTGT
GTCGAATATCTGAAGCACAACGACGTGGGCCGAGCGACGTTCATAGCGCTCGACAAGCAG
CAACACCTCATCAAGTATTGCGAGAACAGGACGACTTATCCGGAGAACGTGCCGCGGCTA
TTCGACTTAGTTCGCGTGAAAGATTCCCGCGTGCTACCGGCGTTTTATTACGCTTTACGC
GACACTTTGGTAGCCTCGAGTCTGGAACAAGCGACGAAGATCGCTTACGGGAACATTCGA
TACAGAGTCGTCACACTCCAAGGAGACGTAATAGAGATAGCAGTCTCAGACGACTTTCTC
ACCTCGTCTGTTCGTGATCACGATCCCTGCAAAGTGAACGAAACGTCGGGAGTATGCGGT
TCAAAACCATCATAA
Protein sequence:
MQKTKTKRGEEPMEVDDNQSPTSDQNVNDDGEIDHISDDEEGGIRIGDIYIPPAAKPALT
FDSTGPRLIITHIVNENFKSYAGVQSLGPFHKSFTAIIGPNGSGKSNVIDSMLFVFGYRA
TKIRSKKISVLIHSSSKFPNITSASVAVHFCQIIDGDGEDFTVVPNSEIVVSRTAAKDNS
SYYTLNGKRVQFKEVAKMLRSHGIDLDHNRFLILQGEVEQIAMMKPKGLTEHESGMLEYL
EDIIGTSRYKEPIEKLSDKVEEYTEMRKEKLNRVRLVEQEKNKLEQPMREAVELMNLTNA
ALRTRNTLLQKYIHETNKIIENKTKELQELKDVLAKIDEKLARIKDELHEKTTELKNGTQ
KYDQLQKQKDDISEKLTQCKKKTVTVQADTTQANKKRKNLEQLIEQEKGKLIDLELIPEK
NKHEIEECEKLLDKHKESKVNAEQELQTVMAGVRSKTQGLQEQKDKLQAKLIDLKKIVDE
ANKNSKLAESELKIYLSTEQKEIEKFNRMKEVYEKAKSDLEEKKSLREDLSSTIPMQEQQ
VKEIQTKLQQIKKEEMSASNEARSLRAQLEESRQAMSANRSRGRVLDCLMKEKREGRLPG
IFGRLGDLGGIDAKYDVAISTCCGALDNIVVDSVETAQRCVEYLKHNDVGRATFIALDKQ
QHLIKYCENRTTYPENVPRLFDLVRVKDSRVLPAFYYALRDTLVASSLEQATKIAYGNIR
YRVVTLQGDVIEIAVSDDFLTSSVRDHDPCKVNETSGVCGSKPS