| New model in OGS2.0 | DPOGS213911 |
|---|---|
| Genomic Position | scaffold2801:+ 13690-25313 |
| See gene structure | |
| CDS Length | 2967 |
| Paired RNAseq reads | 1733 |
| Single RNAseq reads | 4322 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004620 (1e-122) |
| Best Drosophila hit | CG11033 (3e-56) |
| Best Human hit | histone lysine demethylase PHF8 isoform 1 (1e-91) |
| Best NR hit (blastp) | PREDICTED: similar to PHD finger protein 8 [Apis mellifera] (3e-104) |
| Best NR hit (blastx) | PREDICTED: similar to PHD finger protein 8 [Apis mellifera] (2e-99) |
| GeneOntology terms | GO:0033169 histone H3-K9 demethylation GO:0045943 positive regulation of transcription from RNA polymerase I promoter GO:0005515 protein binding GO:0071558 histone demethylase activity (H3-K27 specific) GO:0035574 histone H4-K20 demethylation GO:0071557 histone H3-K27 demethylation GO:0035064 methylated histone residue binding GO:0045893 positive regulation of transcription, DNA-dependent GO:0070544 histone H3-K36 demethylation GO:0035575 histone demethylase activity (H4-K20 specific) GO:0032454 histone demethylase activity (H3-K9 specific) GO:0016568 chromatin modification GO:0045449 regulation of transcription GO:0000082 G1/S transition of mitotic cell cycle GO:0016491 oxidoreductase activity GO:0032452 histone demethylase activity GO:0005634 nucleus GO:0005506 iron ion binding GO:0061188 negative regulation of chromatin silencing at rDNA GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0008270 zinc ion binding GO:0005730 nucleolus GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0051864 histone demethylase activity (H3-K36 specific) GO:0003682 chromatin binding GO:0046872 metal ion binding GO:0055114 oxidation reduction |
| InterPro families | IPR011011 Zinc finger, FYVE/PHD-type IPR019787 Zinc finger, PHD-finger IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase IPR013083 Zinc finger, RING/FYVE/PHD-type IPR019786 Zinc finger, PHD-type, conserved site IPR001965 Zinc finger, PHD-type IPR013129 Transcription factor jumonji |
| Orthology group | MCL13159 |
Nucleotide sequence:
ATGGCGTCATCGAAGGAAACCTATTGTTTGTGTGGCCAACCATATAATATTGGTCAATTT
ATGATAGAATGTGATTGCTGTCGCGAGTGGTTTCATGGAAGCTGTGTTGATGTTAAAATT
TACCATTCGGATGATATAGACAAGTATCACTGTCCAAAATGTGCCCAGACTTATGGACCC
TCAGTTTTGAAAATCCCAACAAACAATCACCGTGCGGATCGCTACGAGCTTGGTGCGGAG
ACACGACCTTCACAAGCCGGATCACCAGCATGGGTCCGAGCACTGTCCGCTCGGCCCATG
AGACCCACAGCCGCAGCTCTAACCACAATGAGACCTGAACAGTTTACCGAGGAGTTTGTC
AGAGATAATTTGTTCACACGACCAGTCATCTTTAATACCTCAGAGGGTCTTGATATGAAG
GTGCCGAATGCCAATACATTTAACGTAAGATCTGTGTTACGATATTGTGGAGCTCAGTTA
GAGGTTGAGGTTATAGATGTACGTAAGCAGTCCACCTTACGGATGCCGCTCGGAGATTTT
GTGGATTACTTTGAGACCCCACAGGAACACAGGGATGAGAAAGTCCTCAATGTACTTAGT
CTGGAGTTCACCGATACCAACATGTGTAGTCTAGTGGAGCCACCACTGATCGCTCGTAGT
CTAGACTGGGCTCGAACTGTATGGTCTAGCGAGGAACCGGCTAGACCTCACGTCCAACGC
TACTGTTTAATGTCAGCGTCTGGCTCCTATACAGACTTCCACATAGACTTTGGTGGTACC
ACAGTCTGGTATCACGTCCTACACGGAAGGAAGGTTTTCTATCTCATTCCACCCACAGCT
ACCAACTTAGCACTATACCAACAATGGAGTGCGGCTAACAATCAAACGGAAAAATTCTTT
GGGGATATGGTGGAATGGTATGGTACAGCTGAGTTAGGTCCCGGCGAGACCCTCTTCATA
CCGACTGGATGGATCCATGCTGTATACACTCCAACAGATTCATTGGTGTTTGGAGGCAAC
CTATTGCACTCATATGCTATCGAGATGCAATTACAGCTAACGGATGCATCAAAGCGTGAC
AATGTACCCAAATGCATAAACTCTGGTCAACTGGTGAGGGAGCTGTGTAAGGAGTTGAGG
ACATTAGAAAAAAGAAATACAACAACAAAAGATAAGGACGTCAAACAGAAGCATCAATCT
CCCACCAAATCTCAGAACAAAAAGCAAGCGGCCACACCAAAAAAACCAATCAAGCTCACT
CTACCCAAACCAATAATGCACATGAACCAGAATACTGAATTCGTCGAGGAGAAAACCTAC
GCAGACAAATATTATGTGGACAACAAGGAGGTCGTGTACGCCGACCGGTACATACAGGAT
GTTAAATATATAGCCGCCGACGTCAAGTACGTCGCCGGCGACAAGTTTGTGAACAGTGAC
GTCAAGTTTGTGAACAGTGACATTAAGTTTGTCAACAGTGACGGCAAGTTTGTGAACAGT
GACGTGAAGTACGTGTTGGACGGGAAGGAGGCGATACTGCCGGAGAAGTATTCGTACCAA
AACTTTGAAGAGGTCAATTACCAGGACAATGGTTACGGAGACAGGCAAGATAAGAAAGCG
GCGCTGAAAGTCAAATTAAGCAACTCCCCATCCTCGTCACGTGAAGAACCTCCGCCCTAT
AGTCTGCCGGAGCACTCCATACTGAAGTCACATCTCATAAGGACGGACAGGAGCTTGAAG
CCCGTACACCAGTGGACCATATCCAAGAAGGACATCGGAGACTATCACGAGGAAGAGATA
TTGTTCACCAACGAGAACCTTCAGACCAATGTCAGGGTCGAGGGACAGGAAATGAACTAT
GGAGCAGGTATGTACTCAGCCGAGGACATGCAGCAAGAATACCAGTATGGAGATACCGCT
AAAGGCTACCACCAGCTCTACCACCCAGACACCTACCACTACACCAGATACGAACAAACC
GTCACCACTCAGCCTCAAACATACAATGGCACCACATACACGGAAACGCAGTTGCCTTCC
TACGACGCGGCCATCGCTCACCAATACCAGAATAATTATGTGATAGAAGAGAAGCCTCCT
CCCAAACCGGAAGTGTCCGTCCGTCGGTCGGAGCGGCCGGTCCGGCGGCGCGTGTCCAGT
TCCTACTCCTACGACGACGACCTCTACATCGACGACACGCCGCCCCCGCGACGGAAGCCG
CCCAGGCAGAAACACAACAAGAACAATGCTACGAACGGTTCGTACCGCGCGCCCTCTAGA
CCGGCCCCTACTAATGGGATCGAGTCGCTGATACAGGCATCCGTATTGGCCGAGGAAGAG
GCGCCGGTTAATGAGACTGAAGACGCAGCCGTGGCAGGTATGTTAAGTATCAGTGAAAGA
TACGAGCCACCAGCCACGTTCGGCATAGCTGTGGATACATCGGAACAAAGAAATAGCAGT
GTCACAACGAGTACGGGTCGGGCGAGAGTACGTAAGAGTATCACGGCAGTGGAGACCATG
GACGAGTTTGATGAAGAGGACGTCATCAAGGAAGTGCATCGGGATGAAGAGTATGTGTAC
CCGTCGCTGGAGATGAGCTCTGACGACGAAGAGGATTGGTCGGCGAGACGGAAGAAAGCG
GCGAGGGTCAGACAGGACAGTCGCGGGAGAAGTGACAAGGACGACTCCTGGTGTCCTCGG
GGTCGCCTGCCCCGTACCCCAGTGAGGCCTCGCCCTACTCGCACAGCCGTGAAGCGGGAG
TGTGTCAGAGCGGCGTTACACGCGGCCTCGGTCAGAACGACGGACAGGCGACCGGAAAGT
GCTAAGCGAGCGGTTCTAGCCACAAAGAGCCGTCGTCCGCCAGCGCCGGTCGCAACACCT
AATAAAAATTCAAGACTGAAGAAAGGCATGAAGACGGCGAAACAGCGCCTCGGGAAGATA
TTGAAGATACATAAAATGATATATTAA
Protein sequence:
MASSKETYCLCGQPYNIGQFMIECDCCREWFHGSCVDVKIYHSDDIDKYHCPKCAQTYGP
SVLKIPTNNHRADRYELGAETRPSQAGSPAWVRALSARPMRPTAAALTTMRPEQFTEEFV
RDNLFTRPVIFNTSEGLDMKVPNANTFNVRSVLRYCGAQLEVEVIDVRKQSTLRMPLGDF
VDYFETPQEHRDEKVLNVLSLEFTDTNMCSLVEPPLIARSLDWARTVWSSEEPARPHVQR
YCLMSASGSYTDFHIDFGGTTVWYHVLHGRKVFYLIPPTATNLALYQQWSAANNQTEKFF
GDMVEWYGTAELGPGETLFIPTGWIHAVYTPTDSLVFGGNLLHSYAIEMQLQLTDASKRD
NVPKCINSGQLVRELCKELRTLEKRNTTTKDKDVKQKHQSPTKSQNKKQAATPKKPIKLT
LPKPIMHMNQNTEFVEEKTYADKYYVDNKEVVYADRYIQDVKYIAADVKYVAGDKFVNSD
VKFVNSDIKFVNSDGKFVNSDVKYVLDGKEAILPEKYSYQNFEEVNYQDNGYGDRQDKKA
ALKVKLSNSPSSSREEPPPYSLPEHSILKSHLIRTDRSLKPVHQWTISKKDIGDYHEEEI
LFTNENLQTNVRVEGQEMNYGAGMYSAEDMQQEYQYGDTAKGYHQLYHPDTYHYTRYEQT
VTTQPQTYNGTTYTETQLPSYDAAIAHQYQNNYVIEEKPPPKPEVSVRRSERPVRRRVSS
SYSYDDDLYIDDTPPPRRKPPRQKHNKNNATNGSYRAPSRPAPTNGIESLIQASVLAEEE
APVNETEDAAVAGMLSISERYEPPATFGIAVDTSEQRNSSVTTSTGRARVRKSITAVETM
DEFDEEDVIKEVHRDEEYVYPSLEMSSDDEEDWSARRKKAARVRQDSRGRSDKDDSWCPR
GRLPRTPVRPRPTRTAVKRECVRAALHAASVRTTDRRPESAKRAVLATKSRRPPAPVATP
NKNSRLKKGMKTAKQRLGKILKIHKMIY