| New model in OGS2.0 | DPOGS201583 |
|---|---|
| Genomic Position | scaffold1320:- 22281-29144 |
| See gene structure | |
| CDS Length | 1536 |
| Paired RNAseq reads | 2254 |
| Single RNAseq reads | 5343 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012206 (6e-09) |
| Best Drosophila hit | supernumerary limbs (0.0) |
| Best Human hit | F-box/WD repeat-containing protein 11 isoform A (0.0) |
| Best NR hit (blastp) | Slimb [Danaus plexippus] (0.0) |
| Best NR hit (blastx) | Slimb [Danaus plexippus] (0.0) |
| GeneOntology terms | GO:0000209 protein polyubiquitination GO:0004842 ubiquitin-protein ligase activity GO:0005515 protein binding GO:0019005 SCF ubiquitin ligase complex GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0043161 proteasomal ubiquitin-dependent protein catabolic process |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR022364 F-box domain, Skp2-like IPR019782 WD40 repeat 2 IPR001810 F-box domain, cyclin-like IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR021977 D domain of beta-TrCP IPR020472 G-protein beta WD-40 repeat |
| Orthology group | MCL11553 |
Nucleotide sequence:
ATGGAAACCGATTGGATGATAGAAGATTCGACGACACCAAAGGTGACGTCATTAACCTCG
TTGGACTCCGGAGTCCGACCGGCTCCCAGCGGAGCTGCCTATGTCGCTGAGAGGAACACG
TGTCTCAACTTGTTCTCAAGATGGAACGAGACAGACCAGGTGGAGTTTGTGGAACAGTTG
CTAGCTCGGATGTGTCACTATCAGCATGGACACATCAACGCCTACCTCAAACCAATGCTG
CAGAGGGACTTCATCAGCATGCTTCCAAAGAAGGGTTTGGATCATGTAGCTGAGAATATT
CTGTCATACTTGGATGCTGGGTCGCTGTGCGCCGCCGAGCTGGTGTGCCGGGAGTGGCAG
AGAGTCATCTCAGAGGGGATGCTGTGGAAGAAACTAGTTGAGAGGAAAGTCAGGACGGAC
TCCTTGTGGAGGGGACTCGCTGATAGGAGAGGATGGATAATGTACCTCTTCAAACCGAAG
CCTGGCTGCCAGCATCCATCCCATTCGTTCTACCGTCAGCTGTATCCCAAGATCATTCAG
GACATACAATCCATAGAAGACAACTGGAGAATGGGCCGACACAACTTACAGAGGATAAAC
TGCAGGTCGGAGAACTCTAAAGGTGTGTACTGCTTACAGTATGACGACAACAAGATAGTC
TCCGGCCTGAGAGACAACACTATCAAGATATGGGATAGGAAAACGTTGCAATGTGTTAAG
GAGCTGCAAGGTCACACGGGTTCCGTCCTATGTCTGCAATATGATGAGCGAGCCATTATA
TCTGGGTCCTCGGACAGTACTGTCCGGGTATGGGATGTAAACACGGGGGCCATGCTCAAT
ACACTGATACATCATTGTGAAGCTGTGCTGCATCTGAGGTTCTGCAATGGAATGATGGTG
ACTTGTAGCAAGGACAGATCGATAGCAGTGTGGGACATGTCTTCGACTACCGAGATCATG
CTGCGGCGGGTCCTCGTCGGTCACAGGGCTGCGGTTAACGTTGTGGACTTTGATGAGAAG
TATATAGTCAGTGCCAGCGGAGATAGGACTATTAAGGTGTGGAATACCTCCTCGTGTGAG
TTTGTCCGGACGTTGAACGGTCACAAACGTGGTATAGCCTGTCTCCAATACAGAGATAGG
TTGGTGGTGTCAGGTTCCTCGGACAACACAATCAGACTGTGGGACATTGAGTGCGGACAG
TGCATCAGGGTGTTGGAAGGTCACGAGGAACTTGTTCGGTGTATACGGTTCGACAACAAG
CGTATAGTCAGCGGGGCATATGATGGGAAGATCAAGGTCTGGGATTTGAGAGCAGCCCTG
GACGTGAGAACACCTCACCAGGACCTCTGCCTACGGACACTAGTGGAACACACGGGCAGA
GTGTTCCGGCTGCAGTTTGATGAATTCCAAATAGTGTCTTCGTCCCACGATGATACAATT
CTAGTGTGGGATTTCCTGAACTACGGTGGGGCTTCGCCAGCGGCGCCCCCGCCCCGTAGG
GCTTCCCCGGAACACGACAGGGCCTTCTATGACTAG
Protein sequence:
METDWMIEDSTTPKVTSLTSLDSGVRPAPSGAAYVAERNTCLNLFSRWNETDQVEFVEQL
LARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENILSYLDAGSLCAAELVCREWQ
RVISEGMLWKKLVERKVRTDSLWRGLADRRGWIMYLFKPKPGCQHPSHSFYRQLYPKIIQ
DIQSIEDNWRMGRHNLQRINCRSENSKGVYCLQYDDNKIVSGLRDNTIKIWDRKTLQCVK
ELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVNTGAMLNTLIHHCEAVLHLRFCNGMMV
TCSKDRSIAVWDMSSTTEIMLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCE
FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGQCIRVLEGHEELVRCIRFDNK
RIVSGAYDGKIKVWDLRAALDVRTPHQDLCLRTLVEHTGRVFRLQFDEFQIVSSSHDDTI
LVWDFLNYGGASPAAPPPRRASPEHDRAFYD