| New model in OGS2.0 | DPOGS201603 |
|---|---|
| Genomic Position | scaffold1320:+ 31646-34711 |
| See gene structure | |
| CDS Length | 2484 |
| Paired RNAseq reads | 1103 |
| Single RNAseq reads | 2513 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012140 (0.0) |
| Best Drosophila hit | CG4996 (7e-94) |
| Best Human hit | coiled-coil domain-containing protein 132 isoform a (1e-130) |
| Best NR hit (blastp) | PREDICTED: similar to CG4996-PA [Apis mellifera] (9e-175) |
| Best NR hit (blastx) | PREDICTED: similar to CG4996-PA [Apis mellifera] (6e-156) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR019514 Protein of unknown function DUF2451, C-terminal IPR019515 Vacuolar protein sorting-associated protein 54 |
| Orthology group | MCL13189 |
Nucleotide sequence:
ATGACTTTGTGTGGCCCCGGAGAGGTAGTATCTGGGAAAGCTCTTCATCTGATATCCCAG
CATCGTGATAACTGTGATCGCGAGTTCGCAGAAATCCAAAACATTCGTGATCAGCTATCA
GATACACTCGAGACCTGTAGGAAGGCCAGGGAACGTCTGAAAGCAGCATCAGACCACTTG
ACTATATCCACCTTCGTCATACTAGCTAATGTCAGAAAGAGACAAATAATAAAACGTGTG
CTGAAGTCTTTGGAACTGTTGAGAAGTCTTCGCAGCGTGGAAAAGGATGTGGCGGAACTA
GTCAACAAAAAGGAGTATTACGAAGCGATCCAGTTGATCCTGAATAGTAAAAAAGCAGCC
GCGGCCCACAAGGAGTATACCTGTATAGCGGATCTAGCGACAAGGCTTCAGGACACCCTG
GACATGACTGAAGAAAAACTGGACTCGGTACTCGCAAGCATCTGCTATAACTTCGACGAG
GTTGTGTTCAAGAAACTCAAGAAGGCGTACGATCTTCTCGGTAAAACACAAGCGGCCATG
GAGCAATTGCATATGCATTATTCGTCCGCGGTGAATGAGTCCGCATTGGAGGCTGTGAAG
CCTTTCTCGACTGAGGTGTCGATGGAGATGAAGTTCCAGGAGATGTGCCAAGCGGTTCCG
ACCACGAAGGCGCCGCTCTGTTTGTTGAATCTCTGTGAGAATCTGTTTCTTGTGATGCGT
AGTTATTACCTGTTGGTTAATTGGCATATAAAAAACGAAGAATATTTACCCAGCTCGGGT
AACGTCTTCGATATTGAGAGGAACGTCAGCCGGGAGTATATAAAGCAGAAGTTAAAGGCT
GGTCTCGTCAGAATCTGGCACGACGTGCAGGCCAAGGTGTCCACGTTCTTGAAGAGTTCA
GGTTTGGAGGAATTCCCATTCGAGAAGTTCATCCAAATGCTCGGTATACTGAGGAAGCTG
ACGCAAGTTGCTGAAGTATTTTGCGGGGATACGTCAGACATGTTGACCGACTTTATAAAG
ACGCAGAGTTTGTCATATATTAAAAATTATCATCGAGGGAGGATGGAGGAATTGAAGCTG
TTCCTGGAGAACGAGGGATGGGAACAATGTCCTGTTAAAACTACCTTCAATGTCTTGAAT
TTGCAAGAGTTCAAACAGTTTAAGAAATATCTGAACTCCGTTAAATCCGACACTGTTAAA
AGCACGCAGTCCGAAACCACGTCGTCTGTGCCGTCGCAGGACGACAGTTTGTATATATCG
AAATATTTCACCGAAAAAACATCAAGGACCCCGTTCGAGATATTCAGAAACGAGAACGTC
ACCAACGAGGATATTTTCGGGCTTGAACCGGAATCCGACGACACTGACGTCTCGGACGAC
GAGCCCGACGAGCTCAGACGAGATTTCGTCGAAGATTCCGACCAGACGGTCCCGTTAAGT
CCATCCAAAGTCAAAGAGACCGTCATAGTCACCAACACAACGCTCTCCGTGCTGAGGAAC
TGCGGACAGTATCTTCAGATCAGCAGATATTTACCACAACTAGCGTTAGAGGTGATCATG
TTCATGAATCAGTTGTTCGACTATTACTTCTACGCCGTCCATCTCTTCTTCACCGCCGAC
TTAGAAGTTTCATCAGCTACGTTATACAGCGCAAAATTAAATTCAGTCCTAAAGAGAATC
ACAAACACCATCAATATGGCGACCGAGGACGGTTTGACGTTCGAGTGCCCGAGCGTTCCC
AATCACCTGGACATGGGATCCGAAGAGAATTTACACGGCTGCAGCGAGAGAATAGTCGCC
GTTGAGAGCGTCATATTCTTAGCAAAGCAATTTGAACTTTTACAACCATACTTAGAGTCG
ATAGTCGCTCCGCACCAGCGGATGATATTGGAACACTTCAAGGAGAACACGCTGGCTGTG
GTGGTGGATTTGCGTATGCCGGTATACATGTGCTCAGCCTCTAAGGCGGTTGACGCAAAA
TCAGCGCTAGTGGCGATGTCTCAGGTGAGATGGGACGTGAAGGATGTGGCGGTGGAACAC
AGCCCATACGTGGATATGATCGTGAGGAAGATCCAGGTGTTTGCTCTGCGCCTGGAGAAC
ATATCGGCCAGGGTGACGCTGAACTGCGACGTCCTCAACTCCGTGTGGGCGATGGTTTCG
AAATTTGTGGTCCATTTGTTAGTCGAAGGCTTCTCGAACGCTACGAAATGCTCAAACGGA
GGAAGAGGTCTAATGCAGTTAGACTATCGGCAGCTGTTCGTGAAGTTGGAGAAGATATCC
GGCTTGAAACCGGTCCCTTATCAAGAATATGTTGATAGGTACGTGAAGGCGTATTATTTG
CCGAGAAATGAGTTGGAGAATTTCGTGAGAGAGCGGACTGAGTATTCAGTTAAGCATCTC
CTGGCTTTGGTCAGTTCCTCGTGTGAGAACAAAAGGGACAGGCAGGCTTTGACCGCCATT
ATTGAGAGCAAAGAGGCAAATTAG
Protein sequence:
MTLCGPGEVVSGKALHLISQHRDNCDREFAEIQNIRDQLSDTLETCRKARERLKAASDHL
TISTFVILANVRKRQIIKRVLKSLELLRSLRSVEKDVAELVNKKEYYEAIQLILNSKKAA
AAHKEYTCIADLATRLQDTLDMTEEKLDSVLASICYNFDEVVFKKLKKAYDLLGKTQAAM
EQLHMHYSSAVNESALEAVKPFSTEVSMEMKFQEMCQAVPTTKAPLCLLNLCENLFLVMR
SYYLLVNWHIKNEEYLPSSGNVFDIERNVSREYIKQKLKAGLVRIWHDVQAKVSTFLKSS
GLEEFPFEKFIQMLGILRKLTQVAEVFCGDTSDMLTDFIKTQSLSYIKNYHRGRMEELKL
FLENEGWEQCPVKTTFNVLNLQEFKQFKKYLNSVKSDTVKSTQSETTSSVPSQDDSLYIS
KYFTEKTSRTPFEIFRNENVTNEDIFGLEPESDDTDVSDDEPDELRRDFVEDSDQTVPLS
PSKVKETVIVTNTTLSVLRNCGQYLQISRYLPQLALEVIMFMNQLFDYYFYAVHLFFTAD
LEVSSATLYSAKLNSVLKRITNTINMATEDGLTFECPSVPNHLDMGSEENLHGCSERIVA
VESVIFLAKQFELLQPYLESIVAPHQRMILEHFKENTLAVVVDLRMPVYMCSASKAVDAK
SALVAMSQVRWDVKDVAVEHSPYVDMIVRKIQVFALRLENISARVTLNCDVLNSVWAMVS
KFVVHLLVEGFSNATKCSNGGRGLMQLDYRQLFVKLEKISGLKPVPYQEYVDRYVKAYYL
PRNELENFVRERTEYSVKHLLALVSSSCENKRDRQALTAIIESKEAN