New model in OGS2.0 | DPOGS201309  |
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Genomic Position | scaffold1094:+ 9055-29958 |
See gene structure | |
CDS Length | 1941 |
Paired RNAseq reads   | 77 |
Single RNAseq reads   | 394 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003099 (0.0) |
Best Drosophila hit   | phosphodiesterase 1c, isoform D (0.0) |
Best Human hit | calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform 3 (3e-134) |
Best NR hit (blastp)   | PREDICTED: similar to Phosphodiesterase 1c CG14940-PA [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to Phosphodiesterase 1c CG14940-PA [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0004117 calmodulin-dependent cyclic-nucleotide phosphodiesterase activity GO:0004867 serine-type endopeptidase inhibitor activity GO:0030162 regulation of proteolysis GO:0009187 cyclic nucleotide metabolic process GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity GO:0048101 calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity GO:0007165 signal transduction GO:0047555 3',5'-cyclic-GMP phosphodiesterase activity GO:0004115 3',5'-cyclic-AMP phosphodiesterase activity |
InterPro families    | IPR002073 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain IPR023174 3'5'-cyclic nucleotide phosphodiesterase, conserved site IPR003607 Metal-dependent phosphohydrolase, HD domain IPR013706 3'5'-cyclic nucleotide phosphodiesterase N-terminal IPR023088 3'5'-cyclic nucleotide phosphodiesterase |
Orthology group | MCL11235 |
Nucleotide sequence:
ATGGGAAATAACTTTAGTAATATATATACTTTACTGGAAAACAATTTCTCTTTTGGCAAG
TCCGCCGGGCGGCGTGGGCGCCCGGTTCCCCGGAACTCATCACCCAAACAAGGCGCGCTG
ACGATAGTTCGCCGCTCTTCAAGCCGTGGGAAGACGGAGAGCTCTCCGCCCACAGACGAA
CAACTAGATCAGTTGGATCTCGACACAGAGCACCTGCCCGCAGTAGACACGCCCGACGCC
TGCGATAAAGCCGCGCTTAGATTACGCTACCTCCTTAGACAATTGAATAAAGGCGAAATA
CCAGCGGAGACTCTACAAAAAAACCTACAGTACGCAGCCAAAGTATTAGAAGCTGTCTAC
ATAGATGAGACCAAGGATAGGAGAGATGCCGAGCGGTCTCGGGCGCAGCAGCCGATCCTC
CACATGCGTCGGCTCCGTACACCATGCTGGACGAGATGTTCTGTAGAGAAACCGATCGAA
GCAAAGAGGTTAGCTGATGAAGATGACGAGCTGTCGGAAGTACAACCAGACGCAGTCCCA
CCAGAAGTACGGGAATGGTTGGCGTCGACTTTCACAAGACAGCTGGCGACCGCTAAACGA
AAGTCAGATGAAAAACCTAAGTTCAGATCCGTGGCTCATGCAATCCGAGCTGGGATATTT
GTCGACAGGATTTATAGACGAGTCACCAGTACAGCACTTATGCAATTCCCCCAAGATGTT
GTTAGAGTACTTAAAACGTTAGATGAGTGGTCTTTCGATGTGTTTGCATTGCACGAGGCT
GCAGCCGGTATGCCTGTCAAGTACTTGGGCTACGAGCTACTCAACAGATATGGAATGATT
CACAAGTTTAAGACGTTAGATGAGTGGTCTTTCGATGTGTTTGCATTGCACGAGGCTGCA
GCCGGTATGCCTGTCAAGTACTTGGGCTACGAGCTACTCAACAGATATGGAATGATTCAC
AAGTTTAAGGTGCCGCCCACTATACTCGAAAACTTCCTCAGTCGGATAGAGGAGGGGTAC
TGCAGGTTTCACAACCCATACCACAATAACTTGCACGCTGCTGATGTGGCCCAAACGGTT
CATTACATGCTCTGCCAGACAGGACTCATGAACTGGTTGTCAGATCTGGAGATATTCGCG
ACTCTGGTAGCAGCAATAGTCCACGATTATGAGCACACAGGCACCACAAACAATTTCCAC
GTCATGTCGGGCTCTGACACTGCTCTGCTCTATAACGATAGGGCTGTGCTCGAGAACCAT
CACATAAGCGCTGCTTTCAGACTACTACGTGATGAAGAATGCAACATCCTGCAGAACCTC
TCCCGTGATGAGTTTCGGGAGTTTCGCACCCTCGTCATAGACATGGTGCTAGCTACAGAC
ATGTCTTTCCACTTTCAACAGTTGAAGAATATGAGGTCACTGCTTTCACTTGCAGAGCCT
ACTGTTGATAAATCGAAAGCTGCGTCCCTTGTACTACACTGCTGTGATATTTCGCATCCA
GCTAAGAGATGGGATCTGCATCACAGATGGACAATGAGCCTTTTAGACGAGTTCTTCCTT
CAAGGCGACAAAGAAAGAGAACTGGGTCTCCCGTTTAGTCCCCTCTGCGATAGAAACAAC
ACTCTCGTTGCAGAATCTCAGATAGGTTTCATTGACTTTATAGTGGAACCCAGCATGGGA
GTTTGTGCAGACATGCTAGAATGTATTCTGGGACCTTTGCACTCTAGTACAAAGAATTCT
ACCAGCACAGCTGGACCGGAATCTATTAGCGAGGAAAGTTCAGGCACTGAACCTAGCACG
AAATTCAAAATCAAAAAACCATGGGTCGCCTGTCTCACGGACAACAAGAAAATTTGGAAA
GAACAAGCTGCAAAAGACGCAGAAGCACGTGCAAAGTTGGAAGAAGAGACGAATGGCACT
TCACCGCCTGCGGATGAATAA
Protein sequence:
MGNNFSNIYTLLENNFSFGKSAGRRGRPVPRNSSPKQGALTIVRRSSSRGKTESSPPTDE
QLDQLDLDTEHLPAVDTPDACDKAALRLRYLLRQLNKGEIPAETLQKNLQYAAKVLEAVY
IDETKDRRDAERSRAQQPILHMRRLRTPCWTRCSVEKPIEAKRLADEDDELSEVQPDAVP
PEVREWLASTFTRQLATAKRKSDEKPKFRSVAHAIRAGIFVDRIYRRVTSTALMQFPQDV
VRVLKTLDEWSFDVFALHEAAAGMPVKYLGYELLNRYGMIHKFKTLDEWSFDVFALHEAA
AGMPVKYLGYELLNRYGMIHKFKVPPTILENFLSRIEEGYCRFHNPYHNNLHAADVAQTV
HYMLCQTGLMNWLSDLEIFATLVAAIVHDYEHTGTTNNFHVMSGSDTALLYNDRAVLENH
HISAAFRLLRDEECNILQNLSRDEFREFRTLVIDMVLATDMSFHFQQLKNMRSLLSLAEP
TVDKSKAASLVLHCCDISHPAKRWDLHHRWTMSLLDEFFLQGDKERELGLPFSPLCDRNN
TLVAESQIGFIDFIVEPSMGVCADMLECILGPLHSSTKNSTSTAGPESISEESSGTEPST
KFKIKKPWVACLTDNKKIWKEQAAKDAEARAKLEEETNGTSPPADE