| New model in OGS2.0 | DPOGS201310 |
|---|---|
| Genomic Position | scaffold1094:+ 35643-38619 |
| See gene structure | |
| CDS Length | 1716 |
| Paired RNAseq reads | 39 |
| Single RNAseq reads | 101 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003100 (0.0) |
| Best Drosophila hit | Oseg5 (1e-99) |
| Best Human hit | intraflagellar transport protein 80 homolog isoform a (1e-129) |
| Best NR hit (blastp) | predicted protein [Nematostella vectensis] (4e-154) |
| Best NR hit (blastx) | predicted protein [Nematostella vectensis] (2e-151) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005813 centrosome GO:0005856 cytoskeleton GO:0005929 cilium GO:0005932 microtubule basal body GO:0035085 cilium axoneme |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL10753 |
Nucleotide sequence:
ATGAATAATAATGGACGTATAGAAAAAAGTGTCAACGCTCATCAAGGTGCCTGCCTAGCT
GCACAATGGAGCCCGGATGGAGCTGGCCTATTAACTGCTGGAGAAGACGGTTTCGTAAAG
ATATGGTCTCGAAATGGCCTGCTAAGGTCGACAGTTATTCAATCCGATGTTCCATGTTAC
TCAGCTCTTTTTAACTCCGACAGTAGTGCTATTTTATATACCAGAGGCAATTCATTGGTG
ATCAAACATTTGAACTCGAGCTCTAAAACCACGAAGTGGAAAGCTCATGAAGGCGTTGTT
TTATGTGTTGCATGGAACGCAAACAATAATTTAATACTTTCCGGCTCGGAAGATGGGTAC
TCGAAGATCTGGGATCAATTTGGTCAGCAAATATCAGTCAGCGTAAAGCACGATCAGCCC
ATAACAAGCGTGAGTTGGTCTCCCGCTGGTGACATGTTTGTCATTGGTAGCTTTAATTTA
ATACGTCTCTGCAATGCTAATGGTTGGTCTCATTGTCTTGAGCGACCTTCAACTGGAAGC
ATCTATAGCATCGTCTGGTCATCAGATGGCACTCAATTAGCTGCTGCGTGCGCTAATGGA
AATGTCCTTTTTGCACATATTATTGAAAGAGAGTACACTTGGAAGAACTACACATGCACA
CAAACTGGACGTAAAGTTATTTCTATCAAAGATATTATTACCGATCAAAATGATCAACTC
GATTACCCTGACAGAGTTATTCAGATAGCTTTGGGCTTTAATCATTTAGTTACAGCTACT
GTCAAACAATGTTTCATACATAAACTAACATCTTGGAACACCCCAGTGACCTTTGACCTT
AAAGAGGGCACAATAAGTATGATACTGCTTGCGGAAAGATGCATATGTGTGATAGAAAGG
GCTGGCGTATCAGTATATAGTTATATGGGTCGGCTGTTAGCAAGTCCTAGATGTTCAAGG
CCAGAAACTCTCGGTAGAGCAGCTGTATCTTTAGGGCCAGATGCTCTGGCTCTTATCGAT
CAAAGCGATAGGAAAATTATACAAGTTTTTGATTTGCCAACTGGATTGATTGTGCGAAGT
TCAACGGACAACACTGTGACAAAATTAACACACAAAATGACCGTGTCTAGCATCGCTCTA
AGCCAAAGTGGACCTATAAATGAAAGGCAACTAGCTTTGTTGGATTATAACAGAGACTTG
TATGTGGTCACCGTCAAGGATTCCAAGCCAAAATTTGTCAAGCTAGGGTCCCAAATTCTT
AGTATTTGCTGGAGTGCAGAAACAGAATTATTAGTTGGTTTACGTGCAAATTCAGCGGTC
GCATGGTGTTGTCCACGCGCTGCCTATAAGAGTGATTGGCTTGCCCTTACTACAGTCACC
AAAGACATCACTGATCTTGGCCGTAATCCTAGTTTACTGAGCGTCGAAGATGGCGTGGCT
TGTATTTGTCGCGGAAATGGTTCACGTACACATATATCACTAGCATCCTTTCCTGAAAAG
CTATTAAAACATATTGATGATAATATGTGGCAGGATGCTCTTCAGCTCTGCCGGACCGTG
GAAGATGAAACTCTCTGGGCCTGTCTTGCTGTTCTGGCTTGGCAACACAACCAGCTCGCG
ATTGCGGAGGAAGCATTTGCTCTAATTCATCAGTACTATCAAGTCTGCTACATTCAACAT
TTACGGAGTACGATTCCAGAAAAACTTACTGCTTAA
Protein sequence:
MNNNGRIEKSVNAHQGACLAAQWSPDGAGLLTAGEDGFVKIWSRNGLLRSTVIQSDVPCY
SALFNSDSSAILYTRGNSLVIKHLNSSSKTTKWKAHEGVVLCVAWNANNNLILSGSEDGY
SKIWDQFGQQISVSVKHDQPITSVSWSPAGDMFVIGSFNLIRLCNANGWSHCLERPSTGS
IYSIVWSSDGTQLAAACANGNVLFAHIIEREYTWKNYTCTQTGRKVISIKDIITDQNDQL
DYPDRVIQIALGFNHLVTATVKQCFIHKLTSWNTPVTFDLKEGTISMILLAERCICVIER
AGVSVYSYMGRLLASPRCSRPETLGRAAVSLGPDALALIDQSDRKIIQVFDLPTGLIVRS
STDNTVTKLTHKMTVSSIALSQSGPINERQLALLDYNRDLYVVTVKDSKPKFVKLGSQIL
SICWSAETELLVGLRANSAVAWCCPRAAYKSDWLALTTVTKDITDLGRNPSLLSVEDGVA
CICRGNGSRTHISLASFPEKLLKHIDDNMWQDALQLCRTVEDETLWACLAVLAWQHNQLA
IAEEAFALIHQYYQVCYIQHLRSTIPEKLTA