New model in OGS2.0 | DPOGS205148  |
---|---|
Genomic Position | scaffold698:- 21070-24593 |
See gene structure | |
CDS Length | 2049 |
Paired RNAseq reads   | 894 |
Single RNAseq reads   | 1991 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008173 (2e-68) |
Best Drosophila hit   | CG11247, isoform C (3e-19) |
Best Human hit | zinc finger protein 573 isoform 4 (9e-20) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger protein [Tribolium castaneum] (3e-27) |
Best NR hit (blastx)   | krueppel c2h2-type zinc finger protein, putative [Pediculus humanus corporis] (1e-35) |
GeneOntology terms    | GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0005634 nucleus GO:0005622 intracellular GO:0046872 metal ion binding GO:0008270 zinc ion binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like |
Orthology group | MCL40234 |
Nucleotide sequence:
ATGGTAGCAAGCTTCCATCCTTTCAAGGTTACCGATGATAAAAATTTTCCAAACAAGATA
TGTTCAGATTGTTTGAACCGAACAATGAATTGCTACCTGTTTGCCCAGCAATGTGAACGA
TCCGAAAGATCATTACGGAATTGTTTCGAGGATATGTACGATAAATTTGAGAAACTTGAT
CCGATTGAACCCGTAAAACGGAGAGGCAAACCTAAATTGAATCCCAACTGTAACATTTTA
TACACAGAACACAACGAAGTCATGAATTACGCTGAACCCATAATAAATATTATCAACACT
GATACTGTTGCCATAGAAGATAATTTCATCACTGAGTTGGAATGCCAGAAATGTTGGCAA
GTTTTACCGACGGCAGAATCACTATTAAATCATGAGAAAATACATCCGAAATCCATGTGG
TACAACTGTAGGTTGTGTGGGAAGTCGTTTGTTAAACGATGCCATTTGAAGAAACATTTG
AAATCTCACAGACAACTCAGTAATTCGGATAACACTGAATCTTCATACAAATGCAATGAC
TGCGGCATCAGCAGCGATACATTATCAGATCACTATCAGCACATAGAGAAACACAAGTTC
AAAGATATGTTTGAGCATTTAATTGAGGGGAATATTGGTAGCTTTTGTGCTATCTGTATG
GATAAAGGTTTGAAAATGGTCGAGTTGTCCGAAATGGTACATTTACACGGAGGTTATCCC
GCTTTAAGCAGGGACTTGACTATTCAGAATGTATTGACAGCGACTATTCCTGGTATTCAA
CTCGATAGCTACATGGGGAATAAAATCTGCGACAGCTGTGTCAATCACGCTCTGAACACA
TATATATTTATAAGCAAAGTACAATATGTCCGGAACAGATTGAACACTTCGGTAACACTT
ATGTTGGATAATCTTAATATAGATGATCCAGAGAGTAATGTTATGGTCGAAATATCTAAG
GAACTGATACTACCATCTGTAAAAGATGCTGATGATACAGATGATTCAGATGAATCCGAC
TACAAAGTAGAGGTTTTAGAAGACGAATTCCGGGTAGAATACAGCGAGAGCGGATCGGAA
TCGGATTTTAAAGAGGATTCTATAGTCTTGAGCAACGATATCCAAGATCAACTCAAAAAT
GTCACTAAGACCTACAGCAAGAAAGTTTTCAATGGATTTCAAATGAAGAATGATGAAGAC
AGTCTAGACGTTTGCAGCGAATTCCTGACTTTCAAGAAGAGAGTGAAAACCAGAAAACGC
GCCCCAAAAATACGTTACACCTGCCCGTTCTGTAATAAAAACTTCATATCAGATTACTTC
CTCAAGAAGCACGCTCTGAAACACATCAACCGGGCGGTCGAATGCGACTTATGTTACGAC
CAGTTCAAATCGAAGTTCCATCTCTTCGAACACAAGAAGATGATGCATCTGTTGCAATCA
CAGAACTATATGACATGCAACATCTGCGGTAGAACCTTCGAAAGTGCGAACAAAATGAAA
ATACATCAGAAATGCCACAGATACAAGGAGTGCCACCTGTGTAACAAATATTTCATCAGC
CAGAAGTACTATGACATTCATATGCAACGGCACGCGGCCAGGTTCAACACATACAGGAAC
AGGGACGAACAGACATGTAGTTTTTGCGAGAAGGCCTGTTCCAACGAAAACGAACTCTCT
CTTCATGTCAATAAAGTCCATTTACAAATTAAACCGTACAGTTGCGATATGTGCGAAAAG
CAGTATTACACGGAATACAACTTGCTGAGTCACAAAAAACTTCACAGTCTACCATGCAAG
GAGATTTGTGAATTTTGTAACAGAGTATTCAAATGTAGGAAGAATTTGGTCATACACGTC
AGAAAGCATATAGGCATAAAACCACATAACTGTCCTGTTTGCAGACAAGCATTCTATTCA
GACAGCATAATGAAGAATCACATGAAAAATTACCACGGAGGTAAATTCTGTTGCAGATTA
TGCCGGACTGTTCTCCAGAGCCAGTTCGATTTGAAAACTCATATAAACGTTGCCCACAGT
TCCATGTAG
Protein sequence:
MVASFHPFKVTDDKNFPNKICSDCLNRTMNCYLFAQQCERSERSLRNCFEDMYDKFEKLD
PIEPVKRRGKPKLNPNCNILYTEHNEVMNYAEPIINIINTDTVAIEDNFITELECQKCWQ
VLPTAESLLNHEKIHPKSMWYNCRLCGKSFVKRCHLKKHLKSHRQLSNSDNTESSYKCND
CGISSDTLSDHYQHIEKHKFKDMFEHLIEGNIGSFCAICMDKGLKMVELSEMVHLHGGYP
ALSRDLTIQNVLTATIPGIQLDSYMGNKICDSCVNHALNTYIFISKVQYVRNRLNTSVTL
MLDNLNIDDPESNVMVEISKELILPSVKDADDTDDSDESDYKVEVLEDEFRVEYSESGSE
SDFKEDSIVLSNDIQDQLKNVTKTYSKKVFNGFQMKNDEDSLDVCSEFLTFKKRVKTRKR
APKIRYTCPFCNKNFISDYFLKKHALKHINRAVECDLCYDQFKSKFHLFEHKKMMHLLQS
QNYMTCNICGRTFESANKMKIHQKCHRYKECHLCNKYFISQKYYDIHMQRHAARFNTYRN
RDEQTCSFCEKACSNENELSLHVNKVHLQIKPYSCDMCEKQYYTEYNLLSHKKLHSLPCK
EICEFCNRVFKCRKNLVIHVRKHIGIKPHNCPVCRQAFYSDSIMKNHMKNYHGGKFCCRL
CRTVLQSQFDLKTHINVAHSSM