| New model in OGS2.0 | DPOGS212015 |
|---|---|
| Genomic Position | scaffold3169:+ 16293-17042 |
| See gene structure | |
| CDS Length | 360 |
| Paired RNAseq reads | 41 |
| Single RNAseq reads | 837 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010170 (2e-37) |
| Best Drosophila hit | n-synaptobrevin, isoform F (5e-27) |
| Best Human hit | vesicle-associated membrane protein 2 (1e-19) |
| Best NR hit (blastp) | hypothetical protein LOC100166654 [Acyrthosiphon pisum] (1e-43) |
| Best NR hit (blastx) | PREDICTED: similar to n-synaptobrevin CG17248-PA, isoform A isoform 1 [Apis mellifera] (4e-29) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0005484 SNAP receptor activity GO:0007269 neurotransmitter secretion GO:0008021 synaptic vesicle GO:0016192 vesicle-mediated transport GO:0016081 synaptic vesicle docking involved in exocytosis GO:0016021 integral to membrane |
| InterPro families | IPR001388 Synaptobrevin IPR016444 Synaptobrevin, metazoa/fungi |
| Orthology group | MCL15833 |
Nucleotide sequence:
ATGCATTTCAGGGCTGCGGAAGGTGGTCTCGCTCCAAATGGCGATGATATGCCAGTTGGG
GGTCCTAAGACACCCCAGCAGATAGCAGCACAACGCCGCTTGCAACAAACGCAGGCTCAG
GTTGATGAGGTTGTTGACATAATGAAAACGAACGTTGAAAAGGTGTTGGAGAGAGATCAA
AAGCTCTCGGAGCTTGACGACAGAGCAGATGCCTTGCAGCAAGGTGCTTCGCAGTTTGAA
CAACAGGCTGGAAAACTGAAAAGCAAATTCTGGCTGCAGAACCTAAAGATGATGATAATT
GCAGCTGTCATTGGAATCATTATTTTGGCTCTTATCATTGGTGAGTACTCGATTTTTTAG
Protein sequence:
MHFRAAEGGLAPNGDDMPVGGPKTPQQIAAQRRLQQTQAQVDEVVDIMKTNVEKVLERDQ
KLSELDDRADALQQGASQFEQQAGKLKSKFWLQNLKMMIIAAVIGIIILALIIGEYSIF