DPGLEAN12870 in OGS1.0

New model in OGS2.0DPOGS216111 
Genomic Positionscaffold2431:- 4803-10441
See gene structure
CDS Length1860
Paired RNAseq reads  1569
Single RNAseq reads  5152
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA009228 (2e-125)
Best Drosophila hit  dalao (6e-80)
Best Human hitSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 (4e-67)
Best NR hit (blastp)  hypothetical protein AaeL_AAEL010903 [Aedes aegypti] (1e-103)
Best NR hit (blastx)  PREDICTED: similar to dalao CG7055-PA [Tribolium castaneum] (5e-93)
GeneOntology terms







  
GO:0016251 general RNA polymerase II transcription factor activity
GO:0016585 chromatin remodeling complex
GO:0003713 transcription coactivator activity
GO:0045893 positive regulation of transcription, DNA-dependent
GO:0035060 brahma complex
GO:0005515 protein binding
GO:0003677 DNA binding
GO:0005634 nucleus
GO:0006338 chromatin remodeling
InterPro families
  
IPR009071 High mobility group, superfamily
IPR000910 High mobility group, HMG1/HMG2
Orthology groupMCL13342

Nucleotide sequence:

ATGATTGCGGGGCCCCCAATGAGTTTCGGTATGATGAAAGGCGGTATGAATGCACCGCCG
CACCATAACCACGTGTACCACCCTCAATACCAGGGTGGGGGGGGCCTGGGTCCCCCCGGG
GTTCATGGGGGGTACGGTTGGCAACACTCGCCGCGTTTCGCTGCAGAGAGCGCTCGCAGG
GCTGCCGGTGCGGCCTCGCAGCCCGGGAAAGATGACAAGACGAGCCCATTCGTGTCAACT
ATACATTCACATCCCGGATTCCAACCACAGAAGATTGGCAAAGGAACTGGTGGGGGTGCT
GGACTGCCAAAACCACCGAAGCCACCAGAAAAGCCGCTTATGCCATACATGAGATATTCA
AGAAGGGTTTGGGACAGTGTGAAGGCAGCAAACCCAGATCTAAAGCTATGGGAAATCGGC
AGAATTATCGGTGGTATGTGGAGAGATCTGCCCCAGTCAGAAAAGTATGCTTTTGTGGAT
GAATACGAAGCTGAGAAGGCGCAGTACACAGAAATGTTGAAAGCATACCAATCATCGCCC
GCATACTTACAGTGGCTGGCTCACAAAAACAAAGGTGATCTTTCGGAATACGAGAAGAGT
TTGAAGACATACCACAATTCCCCGGCGTACCTCGCATACATCGCCGCCAAGAACAAGGCT
GTTGTTGGGAATCTGGAAGAAGAGAGTTCAAGCAAGAAGGGAGGTTCACAGAAGGAGTCA
CAGCAGCAAGACAGAAGAATTGACATCCAACCAGCTGAAGATGAAGACGATCAGGACGAG
GGTCTGTCAGTGAAGCACGTGGCTTACGCCCGCTATCTTCGTAATCACCGTCTCATCAAC
GAGATTTTCTCCGACACGGTGGTGCCAGATGTAAGGTCGGTGGTCACCACCGCTAGGATG
CAGATTTTAAAGAAGCAGGTACAATCGCTGACGATGCATCAGAAGAAATTGGAAGACGAA
CTTCAACAAATTGAAGAGAAGTTTGAAGCAAAGAAAAGGAAGTTCATAGAGAGCAGCGAG
TCCTTCCAGGAGGAGTTGAAGAAGCATTGTAAGCCAGCGGTGGACGACGAGACGTTCGCT
AGAATGGTGGAGCGAGCGGTCGATCAGCAGAGAAGGGGTGCTGCTGGACCACACCCACAC
CCGAATCACCCACACCCCTCGCACCCTCACGCGACTCACCCTACGCATCCTTCACACCCG
ACACATCCCCACCACACGGCACCACAACACGCTCAGCCGGCACACCCTCGGCCTCATGAG
CCAATGGATCAAGATCCGCCCAAACCAGAGGCGAACGGCCCCAACGCCCCCACTCAAGTC
GACAAAGTGTCTACCACGGAGGGGAAACAGGACACAAACATCACCACGGAGTTGAAGGCT
GATGAGAAACAGATCCAGGAAGGAGAAGGTGATCGTAAAGAAGATAAGCCGATTGAAATG
AAAGTCGAGAGTAAGGAGGGGCCTCCGCCGGCCGGGCCGCCACAGCCACAGATCACATCG
CCCCCACACCCAGCTATGATGTTACCTCCGGGAGCTAGCGGTCCGCCACCCGGAGCCAAC
CACGCCCCTCCACCTCCCGGTGGTTATGGCTCAGCGCCGTACGGTGGACGTTACTATCCA
GGCTACGGTGTGGGAGGAGTAGGTCCCGTGGGTCCTGTGGGCGGTGTCGGACCTGTGGGC
GCTGTTGGACCCGTGGGCGCTGTCGGACCCGTGGGCGGTGTGGGCCCAGTGGGTGGCGTC
GGCGGTTTCCCTCCATACTCGCACTACTTCCCAGCGGAGCACTATTCACACCACCCACAG
CACCCCGCTCATCATGACGTTAAGCCTGAGGAACCGCCGGCCAAGAAGGAGTCCGAATGA

Protein sequence:

MIAGPPMSFGMMKGGMNAPPHHNHVYHPQYQGGGGLGPPGVHGGYGWQHSPRFAAESARR
AAGAASQPGKDDKTSPFVSTIHSHPGFQPQKIGKGTGGGAGLPKPPKPPEKPLMPYMRYS
RRVWDSVKAANPDLKLWEIGRIIGGMWRDLPQSEKYAFVDEYEAEKAQYTEMLKAYQSSP
AYLQWLAHKNKGDLSEYEKSLKTYHNSPAYLAYIAAKNKAVVGNLEEESSSKKGGSQKES
QQQDRRIDIQPAEDEDDQDEGLSVKHVAYARYLRNHRLINEIFSDTVVPDVRSVVTTARM
QILKKQVQSLTMHQKKLEDELQQIEEKFEAKKRKFIESSESFQEELKKHCKPAVDDETFA
RMVERAVDQQRRGAAGPHPHPNHPHPSHPHATHPTHPSHPTHPHHTAPQHAQPAHPRPHE
PMDQDPPKPEANGPNAPTQVDKVSTTEGKQDTNITTELKADEKQIQEGEGDRKEDKPIEM
KVESKEGPPPAGPPQPQITSPPHPAMMLPPGASGPPPGANHAPPPPGGYGSAPYGGRYYP
GYGVGGVGPVGPVGGVGPVGAVGPVGAVGPVGGVGPVGGVGGFPPYSHYFPAEHYSHHPQ
HPAHHDVKPEEPPAKKESE