New model in OGS2.0 | DPOGS216111  |
---|---|
Genomic Position | scaffold2431:- 4803-10441 |
See gene structure | |
CDS Length | 1860 |
Paired RNAseq reads   | 1569 |
Single RNAseq reads   | 5152 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009228 (2e-125) |
Best Drosophila hit   | dalao (6e-80) |
Best Human hit | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 (4e-67) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL010903 [Aedes aegypti] (1e-103) |
Best NR hit (blastx)   | PREDICTED: similar to dalao CG7055-PA [Tribolium castaneum] (5e-93) |
GeneOntology terms    | GO:0016251 general RNA polymerase II transcription factor activity GO:0016585 chromatin remodeling complex GO:0003713 transcription coactivator activity GO:0045893 positive regulation of transcription, DNA-dependent GO:0035060 brahma complex GO:0005515 protein binding GO:0003677 DNA binding GO:0005634 nucleus GO:0006338 chromatin remodeling |
InterPro families    | IPR009071 High mobility group, superfamily IPR000910 High mobility group, HMG1/HMG2 |
Orthology group | MCL13342 |
Nucleotide sequence:
ATGATTGCGGGGCCCCCAATGAGTTTCGGTATGATGAAAGGCGGTATGAATGCACCGCCG
CACCATAACCACGTGTACCACCCTCAATACCAGGGTGGGGGGGGCCTGGGTCCCCCCGGG
GTTCATGGGGGGTACGGTTGGCAACACTCGCCGCGTTTCGCTGCAGAGAGCGCTCGCAGG
GCTGCCGGTGCGGCCTCGCAGCCCGGGAAAGATGACAAGACGAGCCCATTCGTGTCAACT
ATACATTCACATCCCGGATTCCAACCACAGAAGATTGGCAAAGGAACTGGTGGGGGTGCT
GGACTGCCAAAACCACCGAAGCCACCAGAAAAGCCGCTTATGCCATACATGAGATATTCA
AGAAGGGTTTGGGACAGTGTGAAGGCAGCAAACCCAGATCTAAAGCTATGGGAAATCGGC
AGAATTATCGGTGGTATGTGGAGAGATCTGCCCCAGTCAGAAAAGTATGCTTTTGTGGAT
GAATACGAAGCTGAGAAGGCGCAGTACACAGAAATGTTGAAAGCATACCAATCATCGCCC
GCATACTTACAGTGGCTGGCTCACAAAAACAAAGGTGATCTTTCGGAATACGAGAAGAGT
TTGAAGACATACCACAATTCCCCGGCGTACCTCGCATACATCGCCGCCAAGAACAAGGCT
GTTGTTGGGAATCTGGAAGAAGAGAGTTCAAGCAAGAAGGGAGGTTCACAGAAGGAGTCA
CAGCAGCAAGACAGAAGAATTGACATCCAACCAGCTGAAGATGAAGACGATCAGGACGAG
GGTCTGTCAGTGAAGCACGTGGCTTACGCCCGCTATCTTCGTAATCACCGTCTCATCAAC
GAGATTTTCTCCGACACGGTGGTGCCAGATGTAAGGTCGGTGGTCACCACCGCTAGGATG
CAGATTTTAAAGAAGCAGGTACAATCGCTGACGATGCATCAGAAGAAATTGGAAGACGAA
CTTCAACAAATTGAAGAGAAGTTTGAAGCAAAGAAAAGGAAGTTCATAGAGAGCAGCGAG
TCCTTCCAGGAGGAGTTGAAGAAGCATTGTAAGCCAGCGGTGGACGACGAGACGTTCGCT
AGAATGGTGGAGCGAGCGGTCGATCAGCAGAGAAGGGGTGCTGCTGGACCACACCCACAC
CCGAATCACCCACACCCCTCGCACCCTCACGCGACTCACCCTACGCATCCTTCACACCCG
ACACATCCCCACCACACGGCACCACAACACGCTCAGCCGGCACACCCTCGGCCTCATGAG
CCAATGGATCAAGATCCGCCCAAACCAGAGGCGAACGGCCCCAACGCCCCCACTCAAGTC
GACAAAGTGTCTACCACGGAGGGGAAACAGGACACAAACATCACCACGGAGTTGAAGGCT
GATGAGAAACAGATCCAGGAAGGAGAAGGTGATCGTAAAGAAGATAAGCCGATTGAAATG
AAAGTCGAGAGTAAGGAGGGGCCTCCGCCGGCCGGGCCGCCACAGCCACAGATCACATCG
CCCCCACACCCAGCTATGATGTTACCTCCGGGAGCTAGCGGTCCGCCACCCGGAGCCAAC
CACGCCCCTCCACCTCCCGGTGGTTATGGCTCAGCGCCGTACGGTGGACGTTACTATCCA
GGCTACGGTGTGGGAGGAGTAGGTCCCGTGGGTCCTGTGGGCGGTGTCGGACCTGTGGGC
GCTGTTGGACCCGTGGGCGCTGTCGGACCCGTGGGCGGTGTGGGCCCAGTGGGTGGCGTC
GGCGGTTTCCCTCCATACTCGCACTACTTCCCAGCGGAGCACTATTCACACCACCCACAG
CACCCCGCTCATCATGACGTTAAGCCTGAGGAACCGCCGGCCAAGAAGGAGTCCGAATGA
Protein sequence:
MIAGPPMSFGMMKGGMNAPPHHNHVYHPQYQGGGGLGPPGVHGGYGWQHSPRFAAESARR
AAGAASQPGKDDKTSPFVSTIHSHPGFQPQKIGKGTGGGAGLPKPPKPPEKPLMPYMRYS
RRVWDSVKAANPDLKLWEIGRIIGGMWRDLPQSEKYAFVDEYEAEKAQYTEMLKAYQSSP
AYLQWLAHKNKGDLSEYEKSLKTYHNSPAYLAYIAAKNKAVVGNLEEESSSKKGGSQKES
QQQDRRIDIQPAEDEDDQDEGLSVKHVAYARYLRNHRLINEIFSDTVVPDVRSVVTTARM
QILKKQVQSLTMHQKKLEDELQQIEEKFEAKKRKFIESSESFQEELKKHCKPAVDDETFA
RMVERAVDQQRRGAAGPHPHPNHPHPSHPHATHPTHPSHPTHPHHTAPQHAQPAHPRPHE
PMDQDPPKPEANGPNAPTQVDKVSTTEGKQDTNITTELKADEKQIQEGEGDRKEDKPIEM
KVESKEGPPPAGPPQPQITSPPHPAMMLPPGASGPPPGANHAPPPPGGYGSAPYGGRYYP
GYGVGGVGPVGPVGGVGPVGAVGPVGAVGPVGGVGPVGGVGGFPPYSHYFPAEHYSHHPQ
HPAHHDVKPEEPPAKKESE