| New model in OGS2.0 | DPOGS216120 |
|---|---|
| Genomic Position | scaffold281:+ 48646-55119 |
| See gene structure | |
| CDS Length | 2187 |
| Paired RNAseq reads | 1475 |
| Single RNAseq reads | 3642 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009285 (2e-74) |
| Best Drosophila hit | CG4806 (2e-47) |
| Best Human hit | RNA-binding protein 28 isoform 1 (3e-35) |
| Best NR hit (blastp) | PREDICTED: similar to CG4806-PA [Nasonia vitripennis] (9e-125) |
| Best NR hit (blastx) | PREDICTED: similar to CG4806 CG4806-PA [Tribolium castaneum] (3e-70) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0003676 nucleic acid binding GO:0000166 nucleotide binding |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR000504 RNA recognition motif domain |
| Orthology group | MCL15582 |
Nucleotide sequence:
ATGACTGAAGAAGATAATAATGAGTCAGAAAACACTAAATACAAGGATGGTGTTAACCGA
AATGCTAGGCTTATTATAAGAAATATCTCGTTTAAGGCCACAGAAGAAAGTTTGCGAGAA
CATTTTGCAAAATATGGCACAGTGGAAGAGGTTAAGCTTCTTAAAAAGGCAGATGGGAAG
CTCGTTGGATGCGCATTTGTCCATTTTACACACGTCCCTATGGCGAATAAAGCAATAGCT
GCTACAAATAAAAAACCTTTTCTAGGTCGACCGATATATGTCTCTTGGGCTGTACCAAAA
CATCAATATAACGGGGAGCAAAATGGAAGTCCAACCAAAAAGAGACAAACAAGTGGCTCC
TCAGATGATGTAAAGGTGGAAGTAAAAGACGAAGATACAGCTGACAATCAAAAGCCAAGT
GAAGATAAGAATAAAATGAGAGTAAATCGCAATGCCCGTCTCATAATTCGTAATGTGTCT
TTCAAAGCTACCGAGGAGTCATTGAAAGAGCATTTTGAACCTTATGGAAACATATTAGAA
GTTAAATTACTGAAGAAGCCCGATGGAAAGCTCGTTGGCTGTGCTTTTGTTCATTTTAAG
AATGTACCGATGGCTAAAAAGGCATTATTGAATACAAACATGAAACCATTTTTAGGCCGT
CCTATATCTGTGGATTGGGCGGTTCCTAAGGACAAGTACATGCAGCATGTGGTCAACAAA
CAGCTGGAGATGCAGGACGATGTGAAGAAGGAGGAATCTGATAGTGATGATGAACTCATG
GATACATCAACTGAAGTGAAGCAGGAGGTTAAGAGTGAATCTGATAGCTCGGATGAAAAT
GATGGTGAAGAATCTGAGGCTGATGAAGAAGAAAAGGAGTCAGATGATGATGAGGATGAT
GAAGACGATGAGAATGATGAAGATGATGATGACGAGGAAGATGAAGATGGTGAAGTTGAC
GAAGATCAAGATGATGATGACGATGATGAGAAAAAAGACATTAAACCAACATTCCAACGT
ACGAAGTTGAATGACGCAGAGGACGGCTGCACGGTGTTCATAACGAACATACCGTTCATG
GTCGCCGACGACCAGCTCAAGACCTTCGCCGAGAACACGGGACCCGTCAAGTATGCACTC
ATATGTGTGGACAAACTGACAGAACATTCTAAAGGATCCGGATTTGTCAAGTTCGCTAAC
AAAGAAGATGCAGAGAAATTTCTCTCCCTTCCGCCAGAACAGCTCCGCCTGGAGGGACAG
GTCTTAGGAGTGAAACCGGCCCTTAAGAAGGAGAACCTGCAACAAGGAAACAAAAAACAG
CCCAAAGATAACAGGAACCTGTACCTAGTCAAAGAAGGAGTGGTGGCGGCCGGTACCCGG
GCGGCCGTCGGCGTGTCCCAGTCCGATATGGCCAAGAGACTTGCCCTCGAACGCAGCAAG
ACTCAAATGTTGAAGAATCTGAACAGATTCGTCTCCCGCTACCGTCTGGTGGTATCCAAC
CTGACCCCCAACATCACGGACCAGGCGCTCCGCCGGCTGGTGTTGAAGGCGTCCCCGGCG
CGCTCCGTCGTCACCGAGGCGAGGGTCATGCGCGATCTTAGAGCTCCCGTGGGCAGAGAC
GGGAGACATCCGTCAAAAGGTTACGGGTTCGTGATGTTTACTCGACACGAGGATGCTCTG
GCTTGTCTCCGGAAGTTGAATAATAACCCCGACATATTCGACACGCATAATAGACCTATC
GTGTCTTTCTCTATAGAAGACCGCACGGCGTTGAACGCAAGGAAGAAGAGATTGGAGAAA
TCGATAGCTAACAATCCACTGGCGAAGAAAGATGATCAAGATAACACAAAGAAGGGACGA
AGAAATAGAAAGAGAAAAATGAACAGCGCTCCCGACGAGAGTTACATGAAGAAGAGGAGA
GTCGAGAACGGAGAGAAGGGAGCCGAGAGTGACTACACGGGAATCACGGCCAAAGAAGGG
ACTCAGCACAAAATAAGAAACATCCATAAACTGAGAGCACAAGCCGACATGCACAAACAG
AACGTGAAGATAGAAAAGAAGAAAAACAAGAAGGCACACAAGATAAAGATGGCGCGCGAG
AGGATAAAACAACCGAAACAGAAGATTAATAAGAACAAGACCGGCAAGAGGAACAAGAAG
CGAAACTCTAGCTTTGAAATACGATAG
Protein sequence:
MTEEDNNESENTKYKDGVNRNARLIIRNISFKATEESLREHFAKYGTVEEVKLLKKADGK
LVGCAFVHFTHVPMANKAIAATNKKPFLGRPIYVSWAVPKHQYNGEQNGSPTKKRQTSGS
SDDVKVEVKDEDTADNQKPSEDKNKMRVNRNARLIIRNVSFKATEESLKEHFEPYGNILE
VKLLKKPDGKLVGCAFVHFKNVPMAKKALLNTNMKPFLGRPISVDWAVPKDKYMQHVVNK
QLEMQDDVKKEESDSDDELMDTSTEVKQEVKSESDSSDENDGEESEADEEEKESDDDEDD
EDDENDEDDDDEEDEDGEVDEDQDDDDDDEKKDIKPTFQRTKLNDAEDGCTVFITNIPFM
VADDQLKTFAENTGPVKYALICVDKLTEHSKGSGFVKFANKEDAEKFLSLPPEQLRLEGQ
VLGVKPALKKENLQQGNKKQPKDNRNLYLVKEGVVAAGTRAAVGVSQSDMAKRLALERSK
TQMLKNLNRFVSRYRLVVSNLTPNITDQALRRLVLKASPARSVVTEARVMRDLRAPVGRD
GRHPSKGYGFVMFTRHEDALACLRKLNNNPDIFDTHNRPIVSFSIEDRTALNARKKRLEK
SIANNPLAKKDDQDNTKKGRRNRKRKMNSAPDESYMKKRRVENGEKGAESDYTGITAKEG
TQHKIRNIHKLRAQADMHKQNVKIEKKKNKKAHKIKMARERIKQPKQKINKNKTGKRNKK
RNSSFEIR