DPGLEAN12908 in OGS1.0

New model in OGS2.0DPOGS201659 
Genomic Positionscaffold1459:- 20100-21326
See gene structure
CDS Length351
Paired RNAseq reads  102
Single RNAseq reads  814
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA005413 (1e-24)
Best Drosophila hit  spt4 (3e-48)
Best Human hittranscription elongation factor SPT4 (4e-46)
Best NR hit (blastp)  PREDICTED: similar to spt4 CG12372-PA isoform 2 [Apis mellifera] (1e-57)
Best NR hit (blastx)  PREDICTED: similar to spt4 CG12372-PA isoform 2 [Apis mellifera] (1e-58)
GeneOntology terms




  
GO:0016582 non-covalent chromatin modification
GO:0005634 nucleus
GO:0003682 chromatin binding
GO:0008159 positive transcription elongation factor activity
GO:0008270 zinc ion binding
GO:0045941 positive regulation of transcription
InterPro families

  
IPR016046 Transcription initiation Spt4-like
IPR022800 Spt4/RpoE2 zinc finger
IPR009287 Transcription initiation Spt4
Orthology groupMCL13855

Nucleotide sequence:

ATGTCCCTCGACACGGTTCCAAAAGATTTAAGAGGTTTAAGAGCATGTTTAGTTTGTTCT
CTAATTAAGACATTCGATCAGTTCGAATATGATGGCTGTGACAATTGCGATGAGTTTCTC
CGGATGAAGAACAATAAGGACAATGTATATGACTGCACAAGTAACAATTTTGATGGAATG
ATTGCAGTTATGAGCCCTGTTGATAGTTGGGTCTGCAAGTGGCAGAGAATAAGTAGATTT
TGTCAAGGTGTGTATGCTATATCTGTGTCGGGCCGGCTTCCAGCTGGTGTTATAAGAGAA
ATGAAGAGTCGCGGTATCGCCTACAGACCCAGAGACACGAGCCAGAGATAA

Protein sequence:

MSLDTVPKDLRGLRACLVCSLIKTFDQFEYDGCDNCDEFLRMKNNKDNVYDCTSNNFDGM
IAVMSPVDSWVCKWQRISRFCQGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQR