| New model in OGS2.0 | DPOGS201661 |
|---|---|
| Genomic Position | scaffold1459:- 5955-6912 |
| See gene structure | |
| CDS Length | 699 |
| Paired RNAseq reads | 291 |
| Single RNAseq reads | 666 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005414 (1e-35) |
| Best Drosophila hit | Seryl-tRNA synthetase (1e-61) |
| Best Human hit | seryl-tRNA synthetase, mitochondrial isoform a precursor (2e-57) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC011377 [Tribolium castaneum] (4e-81) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011377 [Tribolium castaneum] (1e-74) |
| GeneOntology terms | GO:0004828 serine-tRNA ligase activity GO:0006434 seryl-tRNA aminoacylation GO:0005524 ATP binding GO:0005737 cytoplasm |
| InterPro families | IPR002317 Seryl-tRNA synthetase, class IIa IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain IPR006195 Aminoacyl-tRNA synthetase, class II |
| Orthology group | MCL14118 |
Nucleotide sequence:
ATGTCTATCAATAGTGACAGAACACAGATTTACTCATTGGACCCAGTCTATCATGGTCCT
GACCTCTATTTATCAGGGACTGCTGAAATGTCTTTGGCTGGTCTTTTGTCCAACTCGTTA
ACACATAAAAAAGACCTCCCACTGAAATTGGCAGCTGTTAGTAGATGCTATCGTGCTGAA
ACATCAAATGTGGTGGAAGAAAGAGGAATATATAGAGTGCATCAATTTACTAAAGTAGAG
ATGTTTGCAGTTACATTTCCAGAACATTCTGATGAAATGCTAGAATATATCAGACAGACC
CAAGAAGAATTATTTGGACCTCTTGGTCTGTATATGAAAGTTTTGGATATGCCGCCTCAT
GAATTGGGAGCACCAGCTTATAGAAAATATGACATTGAGGCTTGGATGCCAGGACGTAAT
AAATTTGGTGAGATATCAAGCTGTAGCAACTGCACTGATTATCAATCAAGAAGACTTAAT
ATTAAATATAAGGATGGGAATTCTGAGAAATACACACATACATTGAATGGAACTGCTTGT
GCTATACCGAGAATGTTGATCGCATTGCTGGAGACGCACCAAGATGCTAAAGGGAAGATA
CATATACCAACAGTCTTACAACCGTTCATGGATGGAAAGAAATATATAAGTAAAAACACA
GTTGTGCCGAAGTTAAAATTAATTAAACTTAAGAAGTAA
Protein sequence:
MSINSDRTQIYSLDPVYHGPDLYLSGTAEMSLAGLLSNSLTHKKDLPLKLAAVSRCYRAE
TSNVVEERGIYRVHQFTKVEMFAVTFPEHSDEMLEYIRQTQEELFGPLGLYMKVLDMPPH
ELGAPAYRKYDIEAWMPGRNKFGEISSCSNCTDYQSRRLNIKYKDGNSEKYTHTLNGTAC
AIPRMLIALLETHQDAKGKIHIPTVLQPFMDGKKYISKNTVVPKLKLIKLKK