| New model in OGS2.0 | DPOGS210346 |
|---|---|
| Genomic Position | scaffold199:+ 108865-117294 |
| See gene structure | |
| CDS Length | 1542 |
| Paired RNAseq reads | 5578 |
| Single RNAseq reads | 13727 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011983 (8e-175) |
| Best Drosophila hit | CG1640, isoform B (2e-159) |
| Best Human hit | alanine aminotransferase 1 (2e-137) |
| Best NR hit (blastp) | PREDICTED: similar to alanine aminotransferase [Acyrthosiphon pisum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to alanine aminotransferase [Acyrthosiphon pisum] (4e-174) |
| GeneOntology terms | GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity GO:0009058 biosynthetic process GO:0030170 pyridoxal phosphate binding |
| InterPro families | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR001176 1-aminocyclopropane-1-carboxylate synthase IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 IPR004839 Aminotransferase, class I/classII |
| Orthology group | MCL10566 |
Nucleotide sequence:
ATGGTGATAAACCGCGCCGCTGCCAGTCGGGTGTTATCCGGCGTGGTGAAAAGACTGCCG
GGGGAAACGTTATTGAAGGACACGACAACTAACACAAGAACGATGGCGTCAAAGGCTGTG
ACTCTCGAGAACTTGAACCCAAATATTATCAAATTAGAATATGCCGTGAGAGGACCTTTG
GTAATACGAGCTGGAGAAATCGAAAAGGAATTAGAAAAGGGAGCGTCCAAACCCTTCCAG
AAAGTCATCAGGGCCAACATCGGCGACGCCCACGCTATGGGCCAGCGACCCATCACCTTC
ATCAGACAGGTGTTGTCATGTATAACGAATACTGACTTATTAGAAAAAGGCGACTTCCCC
GACGACGTGAAGGACAGGGCCAGGGAGATCCTCTGTGGCTGCGGCGGCGGCTCCGTGGGG
TCGTACTCGGCGTCTCAGGGTATAGAGCACATCAGGCGACACGTTGCGGAGTACATCGCC
AAGAGAGACGGCCACCCCGCCCGCTGGCAGGACATCTGCCTCTCTGCCGGCGCCTCCACC
GCCATCAAGAATTGTCTGCAGCTGTTCTGTAAGGAAATCGACGGCAAGAAGAGCGGTGTA
ATGATCCCCATCCCTCAGTATCCTCTGTACTCGGCGTCGCTGGCGGAGTACGGCCTGGAG
CAGGTCGGCTACTACCTGGACGAGGAGTGCAATTGGGGTCTCAGCACACAGGAGCTGGAG
AGGAGCTTGCAGGAGGCGCAGCAGACCTGCAACGTGCGGGCGCTCGTGGTCATCAACCCC
GGGAACCCCACGGGACAGGTGTTGACGCGAGAGAACATCGAGCAGGTGATAAAGTTCGCG
CACAAACACAAGCTGTTCATCTTCGCCGACGAGGTGTACCAGGACAACGTGTACGCCGAA
GGTAGCGCCTTCCACTCCTTCAAGAAGGTGCTGGTGGAGCTGGGCGCGGAGTACAGCTCG
CAGGAGCTGGCGTCGTTCATGACTATCAGCAAGGGCTACATGGGCGAGTGCGGTCTCCGC
GGCGGCTGGGTGGAGTTGGTGAACATGCTGCCGGAGGTGCAGGCCCAGCTATACAAGTGC
ATGTCAGCCATGCTGTGCCCGTCCGTGCTGGGCCAGGCCGTGGTGGATTGCGTCGCCAAG
CCGCCCGCCCCCGGCGAGCCGTCCTATGACCTCTGGATCAAAGAGAAGACGGACATACTG
ACCTCCCTCAAGGACCGCGCTAAGCTCATCGCCGAGACCTTCAACACCTTCGAGGGGTTC
AAGTGTAACGTGGTGCAGGGCGCGATGTACGCCTTCCCCAGGATCACGCTTCCCCCGAAG
GCGATCCAGGCAGCCAAGGAGAAGAACATGGCGCCGGACGTGTTCTATGCCTTCAGACTG
CTGGAGGAGACAGGCGTGTGTATAGTCCCCGGGTCTGGGTTCGGGCAGGCGCCGGGCACG
TTCCACTTCCGCACCACAATCCTGCCGCAGCCGGACCTCCTCAACACCATGCTGGAGAAC
TTCAGGAACTTCCACAAGAAGTTCACTCAGGAGTACGCCTAG
Protein sequence:
MVINRAAASRVLSGVVKRLPGETLLKDTTTNTRTMASKAVTLENLNPNIIKLEYAVRGPL
VIRAGEIEKELEKGASKPFQKVIRANIGDAHAMGQRPITFIRQVLSCITNTDLLEKGDFP
DDVKDRAREILCGCGGGSVGSYSASQGIEHIRRHVAEYIAKRDGHPARWQDICLSAGAST
AIKNCLQLFCKEIDGKKSGVMIPIPQYPLYSASLAEYGLEQVGYYLDEECNWGLSTQELE
RSLQEAQQTCNVRALVVINPGNPTGQVLTRENIEQVIKFAHKHKLFIFADEVYQDNVYAE
GSAFHSFKKVLVELGAEYSSQELASFMTISKGYMGECGLRGGWVELVNMLPEVQAQLYKC
MSAMLCPSVLGQAVVDCVAKPPAPGEPSYDLWIKEKTDILTSLKDRAKLIAETFNTFEGF
KCNVVQGAMYAFPRITLPPKAIQAAKEKNMAPDVFYAFRLLEETGVCIVPGSGFGQAPGT
FHFRTTILPQPDLLNTMLENFRNFHKKFTQEYA