| New model in OGS2.0 | DPOGS210114 |
|---|---|
| Genomic Position | scaffold2424:+ 6969-11734 |
| See gene structure | |
| CDS Length | 1173 |
| Paired RNAseq reads | 1307 |
| Single RNAseq reads | 3218 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000222 (4e-166) |
| Best Drosophila hit | CG17119, isoform A (1e-90) |
| Best Human hit | cystinosin isoform 1 (6e-67) |
| Best NR hit (blastp) | GK13579 [Drosophila willistoni] (4e-106) |
| Best NR hit (blastx) | PREDICTED: similar to LP12305p [Nasonia vitripennis] (3e-102) |
| GeneOntology terms | GO:0015184 L-cystine transmembrane transporter activity GO:0015811 L-cystine transport GO:0005765 lysosomal membrane GO:0015171 amino acid transmembrane transporter activity GO:0003333 amino acid transmembrane transport |
| InterPro families | IPR005282 Lysosomal cystine transporter IPR006603 Cystinosin/ERS1p repeat |
| Orthology group | MCL12808 |
Nucleotide sequence:
ATGGCTCGACATCATACATCCTTAAGACTCGCTAGTCATAGCTTAAGAAATTACATAGTG
GCTTTCATTTTATTAGGTGTCCCAGCTGGGTATTGCCAGATAAAAAAATTGTATGTTGAT
GTGAAAGATATGAACTTATTGGTGGATGAGACCAGATTGTTCAAATTAGTCCAAATCGGC
TCATACAACACATCCCTCCAAGTGACATCAAACATCCAACATCCTGATATAGTGCAGTTC
GTGCCGCCCGTCGTCGACATCCCCGGGTCCGACCCGCCCAATGCCACCGTCGAGGTGACC
TACGACATATGCGCCTACGGAAAAAGCCCCGGACATTCAGAAGTCACGTTCAATGTCACC
CCGGGTGGTTTCGTTGACATGGACACGGTGTTTGTTCGCGTGACTGTGATGTATTCCAAC
GCGATCTACGTCATATCCTATATCATGGGCTGGATCTACTTCCTGGCGTGGTCCGTATCA
TTCTACCCTCAGATATACATCAACTTCAAGAGGAAGAGCGTAGTCGGCTTGAACTTTGAC
TTCCTGGCCCTAAACATAATGGGATTCGCCATGTATTCACTGTTTAACTGCGGTTTATAC
TTCTCTAAGGACATACAGTCGGAGTATTTCTCCCGTCACCCCCGCAGCCTCAACCCTGTG
CAACTGAACGACGTGTTCTTCTCGCTCCACGCATCATTCGCTACCCTCATCACGATAACG
CAATGCTTCCTATATGAGCGTGAAAACCAGCGAGTGTCGGTGACGGGGCGTTGCGTGCTG
GGTGGGATGGCGGGCGTGGCTCTAGTGTCGGCGAGCGTGGCGGGCGCTGGCAAACTAGCC
TGGCTGGACTTCCTCAATTATTGCAGCTACATCAAGCTTTGCATCACTCTTATCAAATAC
GTGCCTCAGGCGTACATGAACTATAAGAGGAAGTCAACGGTCGGTTGGAGCATTGGGAAC
ATCTTCCTGGATTTCGTCGGCGGTTCGCTATCAGTCCTCCAGATGACCTTGAACGCTTAC
AACTACAACGACTGGGTGTCATTCTTCGGAGACGCGACCAAATTCGGTCTCGGATTATTC
AGCCTGGTGTTTGATATCTTCTTTATATTGCAACACTACGTCTTCTACAGGAACGCCGAC
GAAAAGAAATACGATCTGGAAGCGAAGGCGTGA
Protein sequence:
MARHHTSLRLASHSLRNYIVAFILLGVPAGYCQIKKLYVDVKDMNLLVDETRLFKLVQIG
SYNTSLQVTSNIQHPDIVQFVPPVVDIPGSDPPNATVEVTYDICAYGKSPGHSEVTFNVT
PGGFVDMDTVFVRVTVMYSNAIYVISYIMGWIYFLAWSVSFYPQIYINFKRKSVVGLNFD
FLALNIMGFAMYSLFNCGLYFSKDIQSEYFSRHPRSLNPVQLNDVFFSLHASFATLITIT
QCFLYERENQRVSVTGRCVLGGMAGVALVSASVAGAGKLAWLDFLNYCSYIKLCITLIKY
VPQAYMNYKRKSTVGWSIGNIFLDFVGGSLSVLQMTLNAYNYNDWVSFFGDATKFGLGLF
SLVFDIFFILQHYVFYRNADEKKYDLEAKA