| New model in OGS2.0 | DPOGS207701 |
|---|---|
| Genomic Position | scaffold1399:- 1247-2310 |
| See gene structure | |
| CDS Length | 543 |
| Paired RNAseq reads | 351 |
| Single RNAseq reads | 1180 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009934 (2e-61) |
| Best Drosophila hit | mitochondrial ribosomal protein S18A (2e-42) |
| Best Human hit | 28S ribosomal protein S18a, mitochondrial isoform 1 precursor (2e-12) |
| Best NR hit (blastp) | GI23675 [Drosophila mojavensis] (6e-44) |
| Best NR hit (blastx) | GI23675 [Drosophila mojavensis] (1e-41) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0005763 mitochondrial small ribosomal subunit GO:0006412 translation |
| InterPro families | IPR001648 Ribosomal protein S18 |
| Orthology group | MCL13421 |
Nucleotide sequence:
ATGGCTTTACTAGCTAGAACGGGTGTTTCTTTTTTAAAGAATGCAGTGCTTTCAACATCT
GTACGAACGTTATCATTAACAAATAAGTTAAATTTAAAAGAATTACAAGAACGCAAAGAA
GGCTCAACTCTTGTAGTAGAAGGTGTAAATGTTCCTTCACCTCGGACTGAATTGCTAATT
CGTGCTGAAAATATAAAGGATTTAGTTCAACCTGAAGGGACCCCAAAGGAAACCTGTTAC
ATGTGTGCCCTGGGCTTGGATGTGAAGCATACTGATGTGTTAATTCTGAGTCAATTCGTC
AGATCTGACGGCTGTATGTTACCTCGACGTATAACTGGTTTGTGTCGACGCCAACAGAAA
AAAATTGGGAAAATGGTGTCCATGGCACAGAAAGCTGGTTTGATGATAAATCTGACACCG
AGTTTCTGTAAAAAAGATCCTAAGAAGAGGTACGGCTTTAAGAAGTTCAACTCATATTTC
GATGAAACAACAATATTCCAGAAGAAAATACCAACGCCCTTTGAACATTTGAAGAATCGA
TAA
Protein sequence:
MALLARTGVSFLKNAVLSTSVRTLSLTNKLNLKELQERKEGSTLVVEGVNVPSPRTELLI
RAENIKDLVQPEGTPKETCYMCALGLDVKHTDVLILSQFVRSDGCMLPRRITGLCRRQQK
KIGKMVSMAQKAGLMINLTPSFCKKDPKKRYGFKKFNSYFDETTIFQKKIPTPFEHLKNR