| New model in OGS2.0 | DPOGS204961 |
|---|---|
| Genomic Position | scaffold1156:+ 8396-13381 |
| See gene structure | |
| CDS Length | 1878 |
| Paired RNAseq reads | 1278 |
| Single RNAseq reads | 2898 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011130 (0.0) |
| Best Drosophila hit | CG7706 (7e-99) |
| Best Human hit | kanadaptin (8e-82) |
| Best NR hit (blastp) | PREDICTED: similar to smad nuclear interacting protein [Tribolium castaneum] (5e-134) |
| Best NR hit (blastx) | PREDICTED: similar to smad nuclear interacting protein [Tribolium castaneum] (8e-118) |
| GeneOntology terms | GO:0005634 nucleus GO:0005515 protein binding GO:0005737 cytoplasm GO:0005622 intracellular GO:0003725 double-stranded RNA binding |
| InterPro families | IPR000253 Forkhead-associated (FHA) domain IPR008984 SMAD/FHA domain |
| Orthology group | MCL14002 |
Nucleotide sequence:
ATGTCTGACAACATAGAAAACCCCGACGTGCCGAGCTCACCCAAAATTGAATTTAAAAAG
CCAATACTTTTCGGAAAGATCGGTAAACTACCAAAAAAGTCGAAAGCGGAACCTAGTGCA
ACAGAGGAAAAGAAAGATGAGGAAAAAAATGAAAATACGACTGAAGGTCACTCTAAAAGT
TCTTTACCGCCAGCAGTTTTGCTAAAAGAATTATCAATTCCTATACCATACAAGGAGCCA
AAATGGTCTGGATTTTGTCCGGAAGGATCGGACTATGCTTTGGAGGTACTGAAATCGGGT
ATGATCATGGAAAAAATCGATCTTACGAAAAAAGCCTTCTATGTATTTGGACGTCTTGCA
AATTGTGATGTTGTTATGGCACACCCGACAATATCCAGACATCACGCTGTTCTCCAATAC
AAGGCCTTCGCTAATGACGACGAGCCAGCATCCGGGTGGTATTTATTCGACCTGGGAAGC
ACCCACGGCACGTTCCTGAACAGGGATAGAATAAAGGAGCAACATTACACGAGGGTCAGG
GTGGGACATCAGATTAAATTTGGTTCTAGCACAAGAACTTACATTGTATTGGGTCCAGAC
TTTGATGCTGACGGTGAATCAGAACTGACAGTCACCGAAATAAGACAAAGGGCGCTCAAC
ATGAAGCTGGAGAGAGACAGAATGATAAGAGAAGCCATAGAGCAGAGGGAGAGGGATAGA
GTGGAGGAAGAAAGGAGGAGGGAGGAACAGGGAATTGACTGGGGGATGGGCGAGGACGCT
GATGATGAACCGGATCTGTCAGAGAACCCATACGCCTGTACAGCAAACGAGGAGTTGTTC
CTGGATGATCCAAAGAAGACACTAAGAGGTTACTTCGAGAGGGAGGGTTTAGAACTGGTG
TACGACTGTGATGAACGAGGAATTGGCCAGTTTCTGTGCAGAGTGGAGCTCCCGCTAGAC
GACGCCAGAGGCAGGCCGCTTGTAGCGGAAGTGCTTCACAAAGGAAAGAAAAAAGAGGCT
GTGGTGGCTTGCGCTCTAGAAGCCTGCAGGATACTGGACCGAGCTGGGTTGCTACGACAA
GCCAAACATGAGTCCCGCCGTAAGAAACAGCGTGACTGGTCGGCGGACGACTACTACGAC
TCCGACGATGACACCTTCTTGGACAGGACCGGGAGTGTGGAGAAGAAGAGACAGGCCAGG
ATGGAGAAGAACGGACTGAAGGACACTGAGAAACCACTCACATACGAGGATCTGCTCAAA
CAGATAACGGACATTGAGAACAAAATAGCATCAGAAGAGAAGATTCTAGAAGCTCTGCGA
GTGAAGAGCAAGCAGAGTGAGCTGGTCGACCACGAAGAGGATGCCTTGGACGAGTTCATG
AATACTCTGCACACGGGACACAGCATGGCTCATAAGGCTGAGATATCCAAAGCCAAGATG
AGCATACAGAAGCTAAAAACCGATCTGTCAAAAACCCGTCGCCTGTGCGAACTGGCTCGC
CCCGCGGACGCTCCTCCCCTCCTCAAGAAGGACAGCACACCCGCCATTAAACAGACACAC
GCAGTCACATACGGCAAGAGGATACGGTTAAAAGACGACAAACCGAAGCCAAAGATCATC
AAACAGAGCAAGCGAGAAGAGGAGTTCGTTGAGGAAATGGACTCCGACGAAGATAGTGAA
TCAAAACCCACACCCATCGTGGAAACTGAAAGCAAATCTGATAGTCCAGTCAGAAGAGAC
AGCGATGGCACCGTGGCTGTGGAGACGAAGAAATTGTATGGTCCGATGAGGCCGCCGGAG
AATTATGTTGTACCCGAAAATTATTACGACGAAGCAACTGACAGGGACCTGCCGGAAATA
GAAGAAGGAGTTGAATAA
Protein sequence:
MSDNIENPDVPSSPKIEFKKPILFGKIGKLPKKSKAEPSATEEKKDEEKNENTTEGHSKS
SLPPAVLLKELSIPIPYKEPKWSGFCPEGSDYALEVLKSGMIMEKIDLTKKAFYVFGRLA
NCDVVMAHPTISRHHAVLQYKAFANDDEPASGWYLFDLGSTHGTFLNRDRIKEQHYTRVR
VGHQIKFGSSTRTYIVLGPDFDADGESELTVTEIRQRALNMKLERDRMIREAIEQRERDR
VEEERRREEQGIDWGMGEDADDEPDLSENPYACTANEELFLDDPKKTLRGYFEREGLELV
YDCDERGIGQFLCRVELPLDDARGRPLVAEVLHKGKKKEAVVACALEACRILDRAGLLRQ
AKHESRRKKQRDWSADDYYDSDDDTFLDRTGSVEKKRQARMEKNGLKDTEKPLTYEDLLK
QITDIENKIASEEKILEALRVKSKQSELVDHEEDALDEFMNTLHTGHSMAHKAEISKAKM
SIQKLKTDLSKTRRLCELARPADAPPLLKKDSTPAIKQTHAVTYGKRIRLKDDKPKPKII
KQSKREEEFVEEMDSDEDSESKPTPIVETESKSDSPVRRDSDGTVAVETKKLYGPMRPPE
NYVVPENYYDEATDRDLPEIEEGVE