| New model in OGS2.0 | DPOGS204290 |
|---|---|
| Genomic Position | scaffold1713:+ 22497-25344 |
| See gene structure | |
| CDS Length | 2424 |
| Paired RNAseq reads | 477 |
| Single RNAseq reads | 1448 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007567 (1e-19) |
| Best Drosophila hit | CG3732 (5e-34) |
| Best Human hit | zinc finger Ran-binding domain-containing protein 2 isoform 2 (7e-34) |
| Best NR hit (blastp) | zinc finger protein Ran-binding domain-containing protein, putative [Pediculus humanus corporis] (3e-48) |
| Best NR hit (blastx) | PREDICTED: similar to CG3732-PA [Apis mellifera] (1e-41) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005622 intracellular |
| InterPro families | IPR001876 Zinc finger, RanBP2-type |
| Orthology group | MCL13762 |
Nucleotide sequence:
ATGAACGACGGGGATTGGATATGTAGCGATCCCAATTGTGGAAATATTAACTTTGCACGG
CGGCTAACTTGCTATCGTTGCAATAAAGAAAAACCAAATAGTGGAAAACCATCTACCAAA
AAACTTGGGACGGAAATAGGAAAATCGGCTGCGGAAAAATCACGCGGTCTATTTAATGCC
GACGACTGGCAGTGCAATAAGTGCGCGAATGTAAATTGGGCAAGACGTCAGACTTGCAAT
GTTTGCAATGCACCAAAGTTTGGAGAGGTGGAAGCTCGCACTGGATACGGTGGAGGTTAC
AACGAGCGCGGTGTTGTAGAGTACCGGAGACGAGAATCATCATCATCTGATGAATATGAT
GAGTTTGGGAGAAAGAAACGCAAACGGAAGACAGATGATGACAAGGTTGGCATCACTGAA
GGTCCTGAAAACAAAAAGTTGCCACCAACAATGCTGCAGAGGGATACAAAAATGGGGCCA
TTTTTGCCTGTGCCAGCTCCAAATGTAACTTTGCAAAATAAAAGAGACCCTGAAAAAGTT
AACGGCAGTCTCAGTGATGGTTCTGTGTGTGAACTACCAAAAGTAAATAAAATAGTGTTT
AGGAGAAATCAAATGAATTACAAACAAGATCATGCTACACCTTATAGTAGAACAAACGGT
GTTCAGCGCAAGCGTTTTACTAGTGTAGGTGATAAAGATCAGACGGGATCTTCAGGCTAT
GAAACTGGTTCTAAGAAGGGTAAGAATGACTCTCCAAATCCAAAAATGTATAATCCAGTA
ATGGAAAATAGAGTTTCCTCCACCAACAATGATGTTGTTTATAAATTTACTGGATCTACA
CCTGCCGAAGACTTTGAGGTTACTTACACGGTAGAAGAGAGAGTGAGAGCAGCTGCATTT
GCTATAGTTTATAATAACTGCAAAATAAGTACTGACAAATTTGAATCCTTATATGACAAA
CCGGCTCCAGATTTCAAAACAATATTTGCATGGAGGCAGAGACTTTTATCTACAGGATGT
TTAGTTGATTCTCATTTGGATCTACAGAAAAAGGAGGTTGATAAGTCTCAAATATCCAAA
TCTGTAAGGAAAAAAATTGTCCAAAAATTGCCTAATCCAGATGAAATTGCTATAATATCT
GACTCCGATGACTGTTTACAAAATTCTGAGGTTAGTCAAGTAGTTTTTCCACTAAGGCAA
AAGAGTATTAGTGCTGAAACTTTACTGCTTCCCGGGGCTGACAGTGAAATCAGAAGAACT
GCTGGTTCTGTCAGCACTTTAGATGGCAGAGGATCTCAAGGGAGAAGTCATTCAGCATCT
ACTCATCATAGAACGAGGTCTAGTTCTTGTGATAGCCAAGAATCAAATTATCCCAACTCT
GATATAGAAACCTCTAATAAGAATTTTACGAAGAATAAATCTTTAAAGTCTACTCGGCAA
TCACTTCCAAACTCAGATTCAGAATCAGTGTCGTACAATAGTGACGACGTAGATTTTAGG
TCAAGAGTTTTTGGTGATATGGTAAAAGTAAGACGAAAACAAAAAAAACATTCCAGTCCA
GCTGCCCAAGCTAAATACGTTCCTGATGAAACAAGCCCATTCCAAGGATATAGTACAGTC
AAGTCAATGGAGCAATCACCATTGGCGACAGGAAATATTTACACTTCTAACTTACATAAC
ATGGCCGTTAGCCAAAAGGTTCAAGATACTAGTGCTTTTGACACTGATGCATACTCTAGT
GAGTACGTGCCTACTAGACTAGGAGCTACGGCTAAGAAAAATTATCAAGATTTCAAAAAT
AATGTGAAGAAAAAAGGATTCTGGGCCAAAGGCAATAGCAGTAGTTTCCCAAAACAACAA
TCAACTTCATGTACCAAAATTCCACAGAAACCAATTGAAAATAATTATTTCCCTGAAGAA
CCAGCTTTCGTTACAGTTCAGTCTCCAGTATTATTGAGTAAGGTCGAAGATTTTACTAAA
GATGAATTTGAAAGCTGTGTTTCAGTGGATCAGTACTTGCCATTTGATAAGCCTTTAGAA
CCGTTAGATATGAAGTCGCCTGAAAACACGTCTCGTATTTTCGATCTAGTACAATCAAAT
GCTGTGAATAAAAATAGAAGTATTATGGATATTTTTGATAGCAACGAACAGAATCAAGAG
TGTCCTGATAGGGCAAATGAGTTAGAGGAGAAATTTGACTGTGCCCGGAAAATGTATGAG
ACGGAATGGGATATGGATGACGATGCTCTTTACAAGAACACTGACACCCTTGATATTCCT
CTGCCTAGCAAACGGTCACCATCACCGCAGAATATAAATTGTAACAGAGCCAAGAGTCCC
ATCACAAATATGTTGTATGCGACCAGCCCAGATGTCAAAATCATTTACGCGAGAATCCTC
AAGCTCAAAGTCATATTCCCATAA
Protein sequence:
MNDGDWICSDPNCGNINFARRLTCYRCNKEKPNSGKPSTKKLGTEIGKSAAEKSRGLFNA
DDWQCNKCANVNWARRQTCNVCNAPKFGEVEARTGYGGGYNERGVVEYRRRESSSSDEYD
EFGRKKRKRKTDDDKVGITEGPENKKLPPTMLQRDTKMGPFLPVPAPNVTLQNKRDPEKV
NGSLSDGSVCELPKVNKIVFRRNQMNYKQDHATPYSRTNGVQRKRFTSVGDKDQTGSSGY
ETGSKKGKNDSPNPKMYNPVMENRVSSTNNDVVYKFTGSTPAEDFEVTYTVEERVRAAAF
AIVYNNCKISTDKFESLYDKPAPDFKTIFAWRQRLLSTGCLVDSHLDLQKKEVDKSQISK
SVRKKIVQKLPNPDEIAIISDSDDCLQNSEVSQVVFPLRQKSISAETLLLPGADSEIRRT
AGSVSTLDGRGSQGRSHSASTHHRTRSSSCDSQESNYPNSDIETSNKNFTKNKSLKSTRQ
SLPNSDSESVSYNSDDVDFRSRVFGDMVKVRRKQKKHSSPAAQAKYVPDETSPFQGYSTV
KSMEQSPLATGNIYTSNLHNMAVSQKVQDTSAFDTDAYSSEYVPTRLGATAKKNYQDFKN
NVKKKGFWAKGNSSSFPKQQSTSCTKIPQKPIENNYFPEEPAFVTVQSPVLLSKVEDFTK
DEFESCVSVDQYLPFDKPLEPLDMKSPENTSRIFDLVQSNAVNKNRSIMDIFDSNEQNQE
CPDRANELEEKFDCARKMYETEWDMDDDALYKNTDTLDIPLPSKRSPSPQNINCNRAKSP
ITNMLYATSPDVKIIYARILKLKVIFP