| New model in OGS2.0 | DPOGS210034 |
|---|---|
| Genomic Position | scaffold312:+ 82050-82799 |
| See gene structure | |
| CDS Length | 750 |
| Paired RNAseq reads | 179 |
| Single RNAseq reads | 579 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000464 (1e-92) |
| Best Drosophila hit | CG4338 (3e-66) |
| Best Human hit | hypothetical protein LOC115939 (3e-51) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (2e-77) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL010333 [Aedes aegypti] (3e-74) |
| GeneOntology terms | GO:0030490 maturation of SSU-rRNA GO:0005634 nucleus GO:0005737 cytoplasm GO:0003674 molecular_function |
| InterPro families | IPR007177 Domain of unknown function DUF367 IPR007209 RNase L inhibitor RLI, possible metal-binding domain |
| Orthology group | MCL13724 |
Nucleotide sequence:
ATGGCCCCAAGTAAAAAAGGTGCCGTACGAGGAAAACGATCAAATCAACATGTGGAACGT
AATTATGCCGAGAGGCTACACGATCTGAGTATACAGTCGTCCGAGGAAAGCGAGGAAAGC
ACAGAAAACTCCGACGATGAAGCTGTTCCGCCTTCATTTGCCATTAGTATGTGGGATTTA
AATCACTGCGACCCCAAAAAGTGCTCTGGAAGAAAACTCTCACGACATAACCTTATAAAA
AATCTCAAACTGGGCCAGAGATTCCCAGGACTCGTTTTATCTCCAGTCGGAACACAGTGT
GTAAGTCCTAATGACAAAGAAATTATTGAAAAATTTGGTTTAGCTGTAATAGATTGTTCA
TGGGCGAAGATTGATGAGACTCCATTTGGCAGAATGAAATCGGCACATCCTAGACTGTTG
CCTTTTTTGGTTGCCGCTAATCCTATTAATTACGGAAAACCATATCAGTTAAGTTGCGTT
GAGGCATTGGCCGCAGCTATGTTTATAACAGGACACCGAAAGGAGGCCTCATTTTACTTA
TCTAAGTTTTCATGGGGCCATTCATTTTTAGAACTGAACTCTGAAGTGTTAGATATTTAT
TCGAGTTGTTCTGACAGCAAGAGTGTGGTTGAAGCACAGAATAAATTTTTACAATCTGTA
CAGTCTGAAAAAGATACAAGATCTATGTGGCCGTCTAGCAGTGATTCAGAAACTGATTCT
GAAGAAGTTGAAAATCAAGAAAAATCATAA
Protein sequence:
MAPSKKGAVRGKRSNQHVERNYAERLHDLSIQSSEESEESTENSDDEAVPPSFAISMWDL
NHCDPKKCSGRKLSRHNLIKNLKLGQRFPGLVLSPVGTQCVSPNDKEIIEKFGLAVIDCS
WAKIDETPFGRMKSAHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHRKEASFYL
SKFSWGHSFLELNSEVLDIYSSCSDSKSVVEAQNKFLQSVQSEKDTRSMWPSSSDSETDS
EEVENQEKS